Non-Coding RNA Search

Ss1.1-Pig2-115J11.5

Sequence:


               
               TACTCAGTGATCAACTTAAGCTAGTATCTTGCTTGTGTGGGTTGACGCAAAGTAAATCAC
ACTTTTGTTGACTCCCTGATGTGCAGTTTAATCTTGTTCCTTACCTCCATGGTTTCTTAA
AAGTTCAGGTAGCTTTCTGCAAGGGTTTTTAACTCCGTATTTCTCAAGTTTGCCTCTACT
TCAGGTAACTTCTTGATACTCGTATTTTAAGAATACATAATCTTTATGAAAATAGATAAA
TCTTTAGAATACCAATGAGTTATTTGGCTTGGAGAGTAGAGGCCTGCATTGTTTATTAAA
ATTACTCATGCCATACTTTTTCAGTGTTGTTAAGCCAGAATAAATAAACCTTTTGTCCTT
ATAAGGAAAGGTTTGTAATCAAATATCAGGTAGTTTACTTGCCGACTCATAAGAGTTTTA
CTTTCTTTGGGTGTTGTTTATATTCAATCAAGTTATTTTTTCCCCTTTGCTGCCATACTC
CCTCAAAGAAGAGAACTTAATAGAAAATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTG
CTAGAAGCAGGATCTTTGGAATTTTCTGCACTGCAATTCTTATGGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACTCAGTGATCAACTTAAGCTAGTATCTTGCTTGTGTGGGTTGACGCAAAGTAAATCAC
ACTTTTGTTGACTCCCTGATGTGCAGTTTAATCTTGTTCCTTACCTCCATGGTTTCTTAA
AAGTTCAGGTAGCTTTCTGCAAGGGTTTTTAACTCCGTATTTCTCAAGTTTGCCTCTACT
TCAGGTAACTTCTTGATACTCGTATTTTAAGAATACATAATCTTTATGAAAATAGATAAA
TCTTTAGAATACCAATGAGTTATTTGGCTTGGAGAGTAGAGGCCTGCATTGTTTATTAAA
ATTACTCATGCCATACTTTTTCAGTGTTGTTAAGCCAGAATAAATAAACCTTTTGTCCTT
ATAAGGAAAGGTTTGTAATCAAATATCAGGTAGTTTACTTGCCGACTCATAAGAGTTTTA
CTTTCTTTGGGTGTTGTTTATATTCAATCAAGTTATTTTTTCCCCTTTGCTGCCATACTC
CCTCAAAGAAGAGAACTTAATAGAAAATTTCTTTGTAAAGCATCCTCTACCTCTCAGCTG
CTAGAAGCAGGATCTTTGGAATTTTCTGCACTGCAATTCTTATGGCTG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               5-588, gnl|bosTau2|chr15 (32840688-32840098)
               

               
               5-588, gnl|Mm7|chr7 (98191492-98190701)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-588, gnl|bosTau2|chr15 (32840688-32840098)
               

               
               5-588, gnl|Mm7|chr7 (98191492-98190701)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               sin (0.174948)
               

               
               tra (0.123092)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)
               

               
               tra (0.123092)

	5-588, gnl\|bosTau2\|chr15 (32840688-32840098)
	5-588, gnl\|Mm7\|chr7 (98191492-98190701)