Ss1.1-Pig2-115O14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCCAGTGGCACGACGAGCAGGGCCACAATGGGCTGTGGTACGTGATGCAGGTGGTGAGC CAGCTCCTGGACCCCCGCACCTCGGAGTTCACTGCGGCCTTCGTGGGCCGCCTGGTGTCC ACCCTCATCTCCAAGGCGGGGCGGGAGCTGGGGGAGAACCTGGACCAGATCCTCCGGGCC ATCCTCAGCAAGATGCAGCAGGCAGAGACGCTCAGCGTCATGCAGTCCCTGATCATGGTG TTCGCCCACCTGGTGCACACCCAGCTGGAACCCCTCCTGGAATTCCTGTGCAGCCTCCCG GGGCCGACTGGCAAGCCTGCCCTGGAGTTCGTGATGGCCGAGTGGACCAGCCGGCAGCAC CTCTTCTACGGGCAGTACGAGGGCAAAGTCAGCTCCGTGGCACTGTGCAAGCTGCTGCAG CACGGCATCAACGCGAACGACAAGCGGCTGCAGGACATCCGCGTGAAGGGGGAGGAGATC TACGGCCTGGACGAGGGCGTCCGCACCCGCTCCAAAGCAGCCAAGAACCCTGAGCGCTGG ACAAACATTCCTTTGCTGGTCAAGATCCTGAAGCTGATTATCAACGAGCTGTCCAACCTC CTGGAGGCCAGTGCTGCCCGCCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCCAGTGGCACGACGAGCAGGGCCACAATGGGCTGTGGTACGTGATGCAGGTGGTGAGC CAGCTCCTGGACCCCCGCACCTCGGAGTTCACTGCGGCCTTCGTGGGCCGCCTGGTGTCC ACCCTCATCTCCAAGGCGGGGCGGGAGCTGGGGGAGAACCTGGACCAGATCCTCCGGGCC ATCCTCAGCAAGATGCAGCAGGCAGAGACGCTCAGCGTCATGCAGTCCCTGATCATGGTG TTCGCCCACCTGGTGCACACCCAGCTGGAACCCCTCCTGGAATTCCTGTGCAGCCTCCCG GGGCCGACTGGCAAGCCTGCCCTGGAGTTCGTGATGGCCGAGTGGACCAGCCGGCAGCAC CTCTTCTACGGGCAGTACGAGGGCAAAGTCAGCTCCGTGGCACTGTGCAAGCTGCTGCAG CACGGCATCAACGCGAACGACAAGCGGCTGCAGGACATCCGCGTGAAGGGGGAGGAGATC TACGGCCTGGACGAGGGCGTCCGCACCCGCTCCAAAGCAGCCAAGAACCCTGAGCGCTGG ACAAACATTCCTTTGCTGGTCAAGATCCTGAAGCTGATTATCAACGAGCTGTCCAACCTC CTGGAGGCCAGTGCTGCCCGCCAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 1-225, gnl|bosTau2|chr16 (48669903-48669679) | |
| 1-225, gnl|canFam2|chr7 (4076184-4075890) | |
| 1-225, gnl|danRer3|chrUn (50355758-50355474) | |
| 1-225, gnl|echTel1|scaffold_291230 (61675-61973) | |
| 1-225, gnl|fr1|chrUn (44536299-44536005) | |
| 1-225, gnl|galGal2|chr32 (505231-504939) | |
| 1-225, gnl|hg17|chr1 (198571354-198571648) | |
| 1-225, gnl|Hg17|chr1 (198571419-198571643) | |
| 1-225, gnl|loxAfr1|scaffold_10697 (9017-9311) | |
| 1-225, gnl|mm7|chr1 (135279389-135279096) | |
| 1-225, gnl|Mm7|chr1 (135279322-135279098) | |
| 1-225, gnl|monDom2|scaffold_13 (1443609-1443900) | |
| 1-225, gnl|oryCun1|scaffold_185508 (25276-24983) | |
| 1-225, gnl|panTro1|chr1 (181262701-181262995) | |
| 1-225, gnl|rheMac2|chr1 (168619667-168619373) | |
| 1-225, gnl|rn3|chr13 (48400864-48400571) | |
| 1-225, gnl|tetNig1|chr11 (3026778-3027072) | |
| 1-225, gnl|xenTro1|scaffold_566 (344358-344646) | |
| 390-526, gnl|bosTau2|chr16 (48669021-48668885) | |
| 390-526, gnl|canFam2|chr7 (4074867-4074717) | |
| 390-526, gnl|danRer3|chrUn (50353243-50353101) | |
| 390-526, gnl|dasNov1|scaffold_25392 (18006-18155) | |
| 390-526, gnl|echTel1|scaffold_204082 (867-1018) | |
| 390-526, gnl|fr1|chrUn (44535675-44535527) | |
| 390-526, gnl|galGal2|chr32 (501966-501822) | |
| 390-526, gnl|hg17|chr1 (198573604-198573754) | |
| 390-526, gnl|Hg17|chr1 (198573609-198573746) | |
| 390-526, gnl|loxAfr1|scaffold_10697 (11480-11630) | |
| 390-526, gnl|mm7|chr1 (135277302-135277156) | |
| 390-526, gnl|Mm7|chr1 (135277296-135277159) | |
| 390-526, gnl|monDom2|scaffold_13 (1445234-1445384) | |
| 390-526, gnl|oryCun1|scaffold_185508 (23742-23595) | |
| 390-526, gnl|panTro1|chr1 (181265021-181265171) | |
| 390-526, gnl|rheMac2|chr1 (168617281-168617131) | |
| 390-526, gnl|rn3|chr13 (48398839-48398693) | |
| 390-526, gnl|tetNig1|chr11 (3027417-3027558) | |
| 390-526, gnl|xenTro1|scaffold_566 (345464-345612) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-225, gnl|bosTau2|chr16 (48669903-48669679) | |
| 1-225, gnl|canFam2|chr7 (4076184-4075890) | |
| 1-225, gnl|danRer3|chrUn (50355758-50355474) | |
| 1-225, gnl|echTel1|scaffold_291230 (61675-61973) | |
| 1-225, gnl|fr1|chrUn (44536299-44536005) | |
| 1-225, gnl|galGal2|chr32 (505231-504939) | |
| 1-225, gnl|hg17|chr1 (198571354-198571648) | |
| 1-225, gnl|Hg17|chr1 (198571419-198571643) | |
| 1-225, gnl|loxAfr1|scaffold_10697 (9017-9311) | |
| 1-225, gnl|mm7|chr1 (135279389-135279096) | |
| 1-225, gnl|Mm7|chr1 (135279322-135279098) | |
| 1-225, gnl|monDom2|scaffold_13 (1443609-1443900) | |
| 1-225, gnl|oryCun1|scaffold_185508 (25276-24983) | |
| 1-225, gnl|panTro1|chr1 (181262701-181262995) | |
| 1-225, gnl|rheMac2|chr1 (168619667-168619373) | |
| 1-225, gnl|rn3|chr13 (48400864-48400571) | |
| 1-225, gnl|tetNig1|chr11 (3026778-3027072) | |
| 1-225, gnl|xenTro1|scaffold_566 (344358-344646) | |
| 390-526, gnl|bosTau2|chr16 (48669021-48668885) | |
| 390-526, gnl|canFam2|chr7 (4074867-4074717) | |
| 390-526, gnl|danRer3|chrUn (50353243-50353101) | |
| 390-526, gnl|dasNov1|scaffold_25392 (18006-18155) | |
| 390-526, gnl|echTel1|scaffold_204082 (867-1018) | |
| 390-526, gnl|fr1|chrUn (44535675-44535527) | |
| 390-526, gnl|galGal2|chr32 (501966-501822) | |
| 390-526, gnl|hg17|chr1 (198573604-198573754) | |
| 390-526, gnl|Hg17|chr1 (198573609-198573746) | |
| 390-526, gnl|loxAfr1|scaffold_10697 (11480-11630) | |
| 390-526, gnl|mm7|chr1 (135277302-135277156) | |
| 390-526, gnl|Mm7|chr1 (135277296-135277159) | |
| 390-526, gnl|monDom2|scaffold_13 (1445234-1445384) | |
| 390-526, gnl|oryCun1|scaffold_185508 (23742-23595) | |
| 390-526, gnl|panTro1|chr1 (181265021-181265171) | |
| 390-526, gnl|rheMac2|chr1 (168617281-168617131) | |
| 390-526, gnl|rn3|chr13 (48398839-48398693) | |
| 390-526, gnl|tetNig1|chr11 (3027417-3027558) | |
| 390-526, gnl|xenTro1|scaffold_566 (345464-345612) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cov (0.264306) |