Ss1.1-Pig2-117J05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGTTCAGTGTCTCCATTTTAAGCGGGATCCTTTGCAGCATCCTGGCTGTGCTGAAGTTT ATGCTGGGGAAGGTTCTGACCAGCAGAGCTCTCATAACAGATGGGTTCAACTCCCTCGTG GGGGCCGTGATGGGCTTCTCCATCCTTCTGAGCGCGGAGGTATTCAAGCACAACTCGGCA GTCTGGTACCTGGACGGCAGCATCGGGGTGCTGATCGGACTCACCATATTCGCCTACGGG GTCAAGCTCCTCATCGACATGGTGCCCAGGGTGAGGCAGACGCGCCACTATGAGATGTTT GACTGAAGGTGGCCAGAGGCGGCCAGCCTGCATCTGCATGACGACTGTCCGGACGACGAG AGGTTTCCACGCAGGCAGCCGGTGCCAACATTTAACTGAACATCCAGTTTCTTTTTCGGA AAGTTTGTGCTCACGGGACCGTGGTCCCCCCTGCCGCCAGCAGGTCAGACTGCACTGCCC CCACCCTCCACCGCCCTGCCCCTGCCAGACACCGTAGGACAATGTGCACGGAGCGGGGAC CCGTCTCCAGCGGACACTTTTCCATCTCCTGCAGTAAAAAGGGTTCTTGGGGGTGGGAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGTTCAGTGTCTCCATTTTAAGCGGGATCCTTTGCAGCATCCTGGCTGTGCTGAAGTTT ATGCTGGGGAAGGTTCTGACCAGCAGAGCTCTCATAACAGATGGGTTCAACTCCCTCGTG GGGGCCGTGATGGGCTTCTCCATCCTTCTGAGCGCGGAGGTATTCAAGCACAACTCGGCA GTCTGGTACCTGGACGGCAGCATCGGGGTGCTGATCGGACTCACCATATTCGCCTACGGG GTCAAGCTCCTCATCGACATGGTGCCCAGGGTGAGGCAGACGCGCCACTATGAGATGTTT GACTGAAGGTGGCCAGAGGCGGCCAGCCTGCATCTGCATGACGACTGTCCGGACGACGAG AGGTTTCCACGCAGGCAGCCGGTGCCAACATTTAACTGAACATCCAGTTTCTTTTTCGGA AAGTTTGTGCTCACGGGACCGTGGTCCCCCCTGCCGCCAGCAGGTCAGACTGCACTGCCC CCACCCTCCACCGCCCTGCCCCTGCCAGACACCGTAGGACAATGTGCACGGAGCGGGGAC CCGTCTCCAGCGGACACTTTTCCATCTCCTGCAGTAAAAAGGGTTCTTGGGGGTGGGAGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 103-246, gnl|bosTau2|chr2 (38996514-38996657) | |
| 103-246, gnl|canFam2|chr19 (40358825-40358997) | |
| 103-246, gnl|danRer3|chr19 (10835336-10835179) | |
| 103-246, gnl|dasNov1|scaffold_54516 (8887-9060) | |
| 103-246, gnl|echTel1|scaffold_316353 (506-341) | |
| 103-246, gnl|fr1|chrUn (112782732-112782886) | |
| 103-246, gnl|galGal2|chr7 (31021633-31021800) | |
| 103-246, gnl|hg17|chr2 (135049322-135049497) | |
| 103-246, gnl|Hg17|chr2 (135049477-135049334) | |
| 103-246, gnl|loxAfr1|scaffold_114903 (656-483) | |
| 103-246, gnl|mm7|chr1 (127374759-127374932) | |
| 103-246, gnl|Mm7|chr1 (127374912-127374769) | |
| 103-246, gnl|monDom2|scaffold_2 (20063872-20064043) | |
| 103-246, gnl|oryCun1|scaffold_215414 (629328-629500) | |
| 103-246, gnl|rheMac2|chr13 (117704094-117703919) | |
| 103-246, gnl|rn3|chr13 (40161872-40162042) | |
| 103-246, gnl|tetNig1|chr3 (4146247-4146108) | |
| 103-246, gnl|xenTro1|scaffold_921 (229001-228834) | |
| 247-597, gnl|bosTau2|chr2 (38997972-38998312) | |
| 247-597, gnl|canFam2|chr19 (40357136-40357612) | |
| 247-597, gnl|dasNov1|scaffold_54516 (6772-7234) | |
| 247-597, gnl|echTel1|scaffold_316353 (1578-1134) | |
| 247-597, gnl|galGal2|chr7 (31020188-31020671) | |
| 247-597, gnl|hg17|chr2 (135047575-135048009) | |
| 247-597, gnl|Hg17|chr2 (135048078-135047733) | |
| 247-597, gnl|loxAfr1|scaffold_114903 (1706-1232) | |
| 247-597, gnl|mm7|chr1 (127370222-127370631) | |
| 247-597, gnl|Mm7|chr1 (127370711-127370337) | |
| 247-597, gnl|monDom2|scaffold_2 (20062563-20062949) | |
| 247-597, gnl|oryCun1|scaffold_196419 (4449-4852) | |
| 247-597, gnl|panTro1|chr13 (24045958-24046392) | |
| 247-597, gnl|rheMac2|chr13 (117705840-117705408) | |
| 247-597, gnl|rn3|chr13 (40158197-40158639) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 103-246, gnl|bosTau2|chr2 (38996514-38996657) | |
| 103-246, gnl|canFam2|chr19 (40358825-40358997) | |
| 103-246, gnl|danRer3|chr19 (10835336-10835179) | |
| 103-246, gnl|dasNov1|scaffold_54516 (8887-9060) | |
| 103-246, gnl|echTel1|scaffold_316353 (506-341) | |
| 103-246, gnl|fr1|chrUn (112782732-112782886) | |
| 103-246, gnl|galGal2|chr7 (31021633-31021800) | |
| 103-246, gnl|hg17|chr2 (135049322-135049497) | |
| 103-246, gnl|Hg17|chr2 (135049477-135049334) | |
| 103-246, gnl|loxAfr1|scaffold_114903 (656-483) | |
| 103-246, gnl|mm7|chr1 (127374759-127374932) | |
| 103-246, gnl|Mm7|chr1 (127374912-127374769) | |
| 103-246, gnl|monDom2|scaffold_2 (20063872-20064043) | |
| 103-246, gnl|oryCun1|scaffold_215414 (629328-629500) | |
| 103-246, gnl|rheMac2|chr13 (117704094-117703919) | |
| 103-246, gnl|rn3|chr13 (40161872-40162042) | |
| 103-246, gnl|tetNig1|chr3 (4146247-4146108) | |
| 103-246, gnl|xenTro1|scaffold_921 (229001-228834) | |
| 247-597, gnl|bosTau2|chr2 (38997972-38998312) | |
| 247-597, gnl|canFam2|chr19 (40357136-40357612) | |
| 247-597, gnl|dasNov1|scaffold_54516 (6772-7234) | |
| 247-597, gnl|echTel1|scaffold_316353 (1578-1134) | |
| 247-597, gnl|galGal2|chr7 (31020188-31020671) | |
| 247-597, gnl|hg17|chr2 (135047575-135048009) | |
| 247-597, gnl|Hg17|chr2 (135048078-135047733) | |
| 247-597, gnl|loxAfr1|scaffold_114903 (1706-1232) | |
| 247-597, gnl|mm7|chr1 (127370222-127370631) | |
| 247-597, gnl|Mm7|chr1 (127370711-127370337) | |
| 247-597, gnl|monDom2|scaffold_2 (20062563-20062949) | |
| 247-597, gnl|oryCun1|scaffold_196419 (4449-4852) | |
| 247-597, gnl|panTro1|chr13 (24045958-24046392) | |
| 247-597, gnl|rheMac2|chr13 (117705840-117705408) | |
| 247-597, gnl|rn3|chr13 (40158197-40158639) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) |