Ss1.1-Pig2-118D19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAACACTCCATCCTCCGCGGGAGAGAAAATGTCCATCCAAGTCGAACATCCTGCTGGTGG TTACAGGAAACTGTTTGAAACTGTGGAGGAACTGTCCTCGCCGCTCACAGCTCATGTTAC AGGCAGGATCCCCCTCTGGCTGACCGGCAGTCTCCTTCGCTGTGGGCCAGGACTCTTTGA AGTTGGATCTGAGCCTTTTTACCACCTGTTTGATGGGCAAGCCCTCTTGCACAAGTTTGA CTTTAAAGAAGGACATGTCACGTACCACAGAAGGTTCATCCGCACTGATGCTTACGTACG GGCAATGACTGAGAAAAGGATCGTCATAACAGAATTTGGCACCTGTGCTTTCCCAGACCC CTGCAAGAATATATTTTCCAGGTTTTTTTCTTACTTTCGAGGAGTAGAGGTAACTGACAA TGCCCTTGTTAATATCTACCCAGTGGGGGAAGATTACTATGCCTGCACAGAGACCAACTT CATTACAAAGATTAATCCTGAGACCTTGGAGACAATTAAGCAGGTTGATCTTTGCAACTA TGTCTCAGTCAATGGAGCCACTGCTCATCCCCACATTGAAAATGATGGAACTGTTTACAA CATTGGTAATTGCTTTGGGAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAACACTCCATCCTCCGCGGGAGAGAAAATGTCCATCCAAGTCGAACATCCTGCTGGTGG TTACAGGAAACTGTTTGAAACTGTGGAGGAACTGTCCTCGCCGCTCACAGCTCATGTTAC AGGCAGGATCCCCCTCTGGCTGACCGGCAGTCTCCTTCGCTGTGGGCCAGGACTCTTTGA AGTTGGATCTGAGCCTTTTTACCACCTGTTTGATGGGCAAGCCCTCTTGCACAAGTTTGA CTTTAAAGAAGGACATGTCACGTACCACAGAAGGTTCATCCGCACTGATGCTTACGTACG GGCAATGACTGAGAAAAGGATCGTCATAACAGAATTTGGCACCTGTGCTTTCCCAGACCC CTGCAAGAATATATTTTCCAGGTTTTTTTCTTACTTTCGAGGAGTAGAGGTAACTGACAA TGCCCTTGTTAATATCTACCCAGTGGGGGAAGATTACTATGCCTGCACAGAGACCAACTT CATTACAAAGATTAATCCTGAGACCTTGGAGACAATTAAGCAGGTTGATCTTTGCAACTA TGTCTCAGTCAATGGAGCCACTGCTCATCCCCACATTGAAAATGATGGAACTGTTTACAA CATTGGTAATTGCTTTGGGAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 119-275, gnl|bosTau2|chr3 (49588398-49588242) | |
| 119-275, gnl|canFam2|chr6 (79956611-79956410) | |
| 119-275, gnl|danRer3|chr8 (28714713-28714542) | |
| 119-275, gnl|dasNov1|scaffold_94651 (6273-6475) | |
| 119-275, gnl|echTel1|scaffold_315472 (42978-43172) | |
| 119-275, gnl|fr1|chrUn (301638541-301638721) | |
| 119-275, gnl|hg17|chr1 (68624400-68624600) | |
| 119-275, gnl|Hg17|chr1 (68624568-68624412) | |
| 119-275, gnl|mm7|chr3 (159511107-159510937) | |
| 119-275, gnl|Mm7|chr3 (159510948-159511104) | |
| 119-275, gnl|monDom2|scaffold_40 (6320669-6320479) | |
| 119-275, gnl|oryCun1|scaffold_206069 (53183-53384) | |
| 119-275, gnl|panTro1|chr1 (67186570-67186770) | |
| 119-275, gnl|rheMac2|chr1 (71236896-71237095) | |
| 119-275, gnl|rn3|chr2 (257865916-257865746) | |
| 119-275, gnl|tetNig1|chrUn_random (44641249-44641400) | |
| 119-275, gnl|xenTro1|scaffold_1 (463840-463648) | |
| 374-525, gnl|bosTau2|chr3 (49586571-49586420) | |
| 374-525, gnl|canFam2|chr6 (79959830-79959671) | |
| 374-525, gnl|danRer3|chr8 (28720203-28720016) | |
| 374-525, gnl|dasNov1|scaffold_94651 (4433-4592) | |
| 374-525, gnl|echTel1|scaffold_315472 (40908-41067) | |
| 374-525, gnl|fr1|chrUn (301638094-301638250) | |
| 374-525, gnl|hg17|chr1 (68622231-68622390) | |
| 374-525, gnl|Hg17|chr1 (68622384-68622233) | |
| 374-525, gnl|loxAfr1|scaffold_9152 (8814-8655) | |
| 374-525, gnl|mm7|chr3 (159514116-159513957) | |
| 374-525, gnl|Mm7|chr3 (159513961-159514112) | |
| 374-525, gnl|monDom2|scaffold_40 (6322808-6322649) | |
| 374-525, gnl|oryCun1|scaffold_206069 (50586-50745) | |
| 374-525, gnl|panTro1|chr1 (67184393-67184552) | |
| 374-525, gnl|rheMac2|chr1 (71234773-71234932) | |
| 374-525, gnl|rn3|chr19 (47219066-47218904) | |
| 374-525, gnl|tetNig1|chrUn_random (44640777-44640949) | |
| 374-525, gnl|xenTro1|scaffold_1 (465093-464937) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 119-275, gnl|bosTau2|chr3 (49588398-49588242) | |
| 119-275, gnl|canFam2|chr6 (79956611-79956410) | |
| 119-275, gnl|danRer3|chr8 (28714713-28714542) | |
| 119-275, gnl|dasNov1|scaffold_94651 (6273-6475) | |
| 119-275, gnl|echTel1|scaffold_315472 (42978-43172) | |
| 119-275, gnl|fr1|chrUn (301638541-301638721) | |
| 119-275, gnl|hg17|chr1 (68624400-68624600) | |
| 119-275, gnl|Hg17|chr1 (68624568-68624412) | |
| 119-275, gnl|mm7|chr3 (159511107-159510937) | |
| 119-275, gnl|Mm7|chr3 (159510948-159511104) | |
| 119-275, gnl|monDom2|scaffold_40 (6320669-6320479) | |
| 119-275, gnl|oryCun1|scaffold_206069 (53183-53384) | |
| 119-275, gnl|panTro1|chr1 (67186570-67186770) | |
| 119-275, gnl|rheMac2|chr1 (71236896-71237095) | |
| 119-275, gnl|rn3|chr2 (257865916-257865746) | |
| 119-275, gnl|tetNig1|chrUn_random (44641249-44641400) | |
| 119-275, gnl|xenTro1|scaffold_1 (463840-463648) | |
| 374-525, gnl|bosTau2|chr3 (49586571-49586420) | |
| 374-525, gnl|canFam2|chr6 (79959830-79959671) | |
| 374-525, gnl|danRer3|chr8 (28720203-28720016) | |
| 374-525, gnl|dasNov1|scaffold_94651 (4433-4592) | |
| 374-525, gnl|echTel1|scaffold_315472 (40908-41067) | |
| 374-525, gnl|fr1|chrUn (301638094-301638250) | |
| 374-525, gnl|hg17|chr1 (68622231-68622390) | |
| 374-525, gnl|Hg17|chr1 (68622384-68622233) | |
| 374-525, gnl|loxAfr1|scaffold_9152 (8814-8655) | |
| 374-525, gnl|mm7|chr3 (159514116-159513957) | |
| 374-525, gnl|Mm7|chr3 (159513961-159514112) | |
| 374-525, gnl|monDom2|scaffold_40 (6322808-6322649) | |
| 374-525, gnl|oryCun1|scaffold_206069 (50586-50745) | |
| 374-525, gnl|panTro1|chr1 (67184393-67184552) | |
| 374-525, gnl|rheMac2|chr1 (71234773-71234932) | |
| 374-525, gnl|rn3|chr19 (47219066-47218904) | |
| 374-525, gnl|tetNig1|chrUn_random (44640777-44640949) | |
| 374-525, gnl|xenTro1|scaffold_1 (465093-464937) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ret (0.128733) |