Non-Coding RNA Search

Ss1.1-Pig2-118I15.5

Sequence:


               
               AGCAGTTACAGTCATGAATGAATAATAAATATTTGAATTTATTTTTAGTTGTTCATGAGG
CATCTGTACAACTTGTGTTCTAAGGACTATAACAGAAAGAAAAACAAGGCATTGATTTTA
AGCTTTGCATCCTCACTGAATTTCAAAGGGAAGGCTGTGAGACTTAAAGATCAGGCGCTT
TTGACATAATTACCTAAAATGGCTTGAAAATGTTAAAACGATTTATTCGTGTTCTTTCTG
GGGAGTTAGAGGAAGACTCTCCAAGTACGACGTAATAGACAAGGAACTTCAGTGACAGGG
GCAGGGTGTATAAACTTAAGTAACCATCATTCAGGCCCTGTGCTTAGTCCTGGTAGTATA
GTTGTGGTGGAATAGAGAAATTACTCGGCCCTGTTGGAGTTTATAATCTAATTTGAGAGT
GAGGATCCCTACCTTTTTAGAACTTTGAGTGGGAAAGATACACAAAATTAGACTCTCTAG
GCACACTGATCTTCCCACATACATTGAGATTGAAGAAAGATACTGTATTTCATGTTGTGC
CTGGCAGAATTAGTTAAATTATTTTAATTTTGGTTCATTTGCATCTGCTTCCTGTGCTCA
GGGCTGTTTGCCCCCAGCTTCAGTAAAGAGACCCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCAGTTACAGTCATGAATGAATAATAAATATTTGAATTTATTTTTAGTTGTTCATGAGG
CATCTGTACAACTTGTGTTCTAAGGACTATAACAGAAAGAAAAACAAGGCATTGATTTTA
AGCTTTGCATCCTCACTGAATTTCAAAGGGAAGGCTGTGAGACTTAAAGATCAGGCGCTT
TTGACATAATTACCTAAAATGGCTTGAAAATGTTAAAACGATTTATTCGTGTTCTTTCTG
GGGAGTTAGAGGAAGACTCTCCAAGTACGACGTAATAGACAAGGAACTTCAGTGACAGGG
GCAGGGTGTATAAACTTAAGTAACCATCATTCAGGCCCTGTGCTTAGTCCTGGTAGTATA
GTTGTGGTGGAATAGAGAAATTACTCGGCCCTGTTGGAGTTTATAATCTAATTTGAGAGT
GAGGATCCCTACCTTTTTAGAACTTTGAGTGGGAAAGATACACAAAATTAGACTCTCTAG
GCACACTGATCTTCCCACATACATTGAGATTGAAGAAAGATACTGTATTTCATGTTGTGC
CTGGCAGAATTAGTTAAATTATTTTAATTTTGGTTCATTTGCATCTGCTTCCTGTGCTCA
GGGCTGTTTGCCCCCAGCTTCAGTAAAGAGACCCTG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               317-636, gnl|bosTau2|chr12 (2789617-2789304)
               

               
               317-636, gnl|Hg17|chr13 (52136998-52137315)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               317-636, gnl|bosTau2|chr12 (2789617-2789304)
               

               
               317-636, gnl|Hg17|chr13 (52136998-52137315)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	317-636, gnl\|bosTau2\|chr12 (2789617-2789304)
	317-636, gnl\|Hg17\|chr13 (52136998-52137315)