Ss1.1-Pig2-119J21.5
|
TCATCGTGCCCTACCCAGAGACAGACAACTGGTATCTCTCCCTGCAGCTCATGTGCCCTG
AGAGTCCTGAGGAGTGTGAGCAGGCCTCGGTCCTTGTGGAGACCAGCTTCTACTTGGTGC
CCTGTCTGGACGACTGCGGACCCTACGGCCAGTGCCTCCTGCTGCGCAGACACGGCTACC
TTTATGCGGGCTGCAGCTGCAAAGCAGGCTGGCGCGGGTGGAGCTGCACAGACAACAGCA
CAGCACAGACCTTGGCCCAGCAGAGGGTGGCCGCCCTCTTGCTCACGCTCAGCAACCTCA
TGTTCCTGGCTCCCATTGCCGTCTCCGTGCACCGCTCCCTCCTGGTGGAGGCCGCTGTCT
ACACCTACACCATGTTCTTCTCCACGTTCTACCATGCTTGCGACCAGCCAGGGGATGCCG
TGCTGTGTATCCTCAACTATGACACGCTGCAGTACTGTGACTTCCTGGGCTCTGGGGTGT
CCGTCTGGGTCACCGTGCTCTGCATGGCGAGACTGAAGGCAGCCCCGAAATACGTTCTGT
TTCTCCTGGGCACCCTGGTCTTCGCCATGTCCTTGC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TCATCGTGCCCTACCCAGAGACAGACAACTGGTATCTCTCCCTGCAGCTCATGTGCCCTG
AGAGTCCTGAGGAGTGTGAGCAGGCCTCGGTCCTTGTGGAGACCAGCTTCTACTTGGTGC
CCTGTCTGGACGACTGCGGACCCTACGGCCAGTGCCTCCTGCTGCGCAGACACGGCTACC
TTTATGCGGGCTGCAGCTGCAAAGCAGGCTGGCGCGGGTGGAGCTGCACAGACAACAGCA
CAGCACAGACCTTGGCCCAGCAGAGGGTGGCCGCCCTCTTGCTCACGCTCAGCAACCTCA
TGTTCCTGGCTCCCATTGCCGTCTCCGTGCACCGCTCCCTCCTGGTGGAGGCCGCTGTCT
ACACCTACACCATGTTCTTCTCCACGTTCTACCATGCTTGCGACCAGCCAGGGGATGCCG
TGCTGTGTATCCTCAACTATGACACGCTGCAGTACTGTGACTTCCTGGGCTCTGGGGTGT
CCGTCTGGGTCACCGTGCTCTGCATGGCGAGACTGAAGGCAGCCCCGAAATACGTTCTGT
TTCTCCTGGGCACCCTGGTCTTCGCCATGTCCTTGC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
205-386, gnl|bosTau2|chr25 (1484953-1485134) |
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205-386, gnl|canFam2|chr6 (43185276-43185070) |
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205-386, gnl|danRer3|chr1 (6767669-6767482) |
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205-386, gnl|dasNov1|scaffold_1119 (58495-58685) |
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205-386, gnl|echTel1|scaffold_298221 (6066-5876) |
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205-386, gnl|fr1|chrUn (32267601-32267400) |
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205-386, gnl|galGal2|chr14 (13984728-13984539) |
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205-386, gnl|hg17|chr16 (364217-364418) |
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205-386, gnl|Hg17|chr16 (364403-364222) |
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205-386, gnl|loxAfr1|scaffold_58819 (7554-7364) |
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205-386, gnl|mm7|chr17 (24303709-24303513) |
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205-386, gnl|Mm7|chr17 (24303521-24303702) |
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205-386, gnl|monDom2|scaffold_49 (8776584-8776771) |
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205-386, gnl|oryCun1|scaffold_192719 (6194-5998) |
|
205-386, gnl|panTro1|chr18 (393211-393412) |
|
205-386, gnl|rheMac2|chr20 (361007-361208) |
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205-386, gnl|rn3|chr10 (15392405-15392208) |
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205-386, gnl|tetNig1|chr15 (2735312-2735513) |
|
205-386, gnl|xenTro1|scaffold_142 (69500-69226) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
205-386, gnl|bosTau2|chr25 (1484953-1485134) |
|
205-386, gnl|canFam2|chr6 (43185276-43185070) |
|
205-386, gnl|danRer3|chr1 (6767669-6767482) |
|
205-386, gnl|dasNov1|scaffold_1119 (58495-58685) |
|
205-386, gnl|echTel1|scaffold_298221 (6066-5876) |
|
205-386, gnl|fr1|chrUn (32267601-32267400) |
|
205-386, gnl|galGal2|chr14 (13984728-13984539) |
|
205-386, gnl|hg17|chr16 (364217-364418) |
|
205-386, gnl|Hg17|chr16 (364403-364222) |
|
205-386, gnl|loxAfr1|scaffold_58819 (7554-7364) |
|
205-386, gnl|mm7|chr17 (24303709-24303513) |
|
205-386, gnl|Mm7|chr17 (24303521-24303702) |
|
205-386, gnl|monDom2|scaffold_49 (8776584-8776771) |
|
205-386, gnl|oryCun1|scaffold_192719 (6194-5998) |
|
205-386, gnl|panTro1|chr18 (393211-393412) |
|
205-386, gnl|rheMac2|chr20 (361007-361208) |
|
205-386, gnl|rn3|chr10 (15392405-15392208) |
|
205-386, gnl|tetNig1|chr15 (2735312-2735513) |
|
205-386, gnl|xenTro1|scaffold_142 (69500-69226) |
