Ss1.1-Pig2-119L16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGACCCCTTCAAATCTGACCCATTTAAAGGAGCCGATCCCTTCAAAGGTGACCCATTCC AGAGTGACCCCTTTGCAGAACAACAGACGGCTTCAACAGATCCTTTTGGAGGGGATCCTT TCAAAGAAAGCGACCCGTTCCGTGGCTCTGCCCCCGATGACTTCTTTAAGAAACAGACAA AGAATGACCCATTTACCTCAGACCCATTCACGAAAAACCCTTCCTTGCCTTCAAAGCTCG ACCCCTTTGAATCCAGTGATCCTTTTTCATCATCCAGTGTCTCCTCAAAAGGATCAGGTC CCTTTGGAACCTTAGACCCCTTCGGAAGTGGGTCCTTCAATAGTGCTGAGGGCTTTGCCG ACTTCAGCCAGATGTCCAAGGCTGCACAAATGTGCACTTGTGACTTCAGAGCCAGTGCAC CTTCCTGTTGGTGGCGCTGGGTGGGACAGAGCTGGACAGGGCTGTGGAAAGTTTGTCTCC GGTACTCCATTGTTTTGTTTCCACGATCCCGTCAGCTCCTGCTCTCATGCCACTTGCCCA GACGAATACAGGGCCCTAACCCCCAGGTCTCTGTTTTTCCCTTTTGGTTCCCTTTCTGTT TTTCAAGAACAACATCGTGTGTATAAATAAAATGCTGAAGGAAATGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGACCCCTTCAAATCTGACCCATTTAAAGGAGCCGATCCCTTCAAAGGTGACCCATTCC AGAGTGACCCCTTTGCAGAACAACAGACGGCTTCAACAGATCCTTTTGGAGGGGATCCTT TCAAAGAAAGCGACCCGTTCCGTGGCTCTGCCCCCGATGACTTCTTTAAGAAACAGACAA AGAATGACCCATTTACCTCAGACCCATTCACGAAAAACCCTTCCTTGCCTTCAAAGCTCG ACCCCTTTGAATCCAGTGATCCTTTTTCATCATCCAGTGTCTCCTCAAAAGGATCAGGTC CCTTTGGAACCTTAGACCCCTTCGGAAGTGGGTCCTTCAATAGTGCTGAGGGCTTTGCCG ACTTCAGCCAGATGTCCAAGGCTGCACAAATGTGCACTTGTGACTTCAGAGCCAGTGCAC CTTCCTGTTGGTGGCGCTGGGTGGGACAGAGCTGGACAGGGCTGTGGAAAGTTTGTCTCC GGTACTCCATTGTTTTGTTTCCACGATCCCGTCAGCTCCTGCTCTCATGCCACTTGCCCA GACGAATACAGGGCCCTAACCCCCAGGTCTCTGTTTTTCCCTTTTGGTTCCCTTTCTGTT TTTCAAGAACAACATCGTGTGTATAAATAAAATGCTGAAGGAAATGAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 97-236, gnl|bosTau2|chr7 (5626278-5626139) | |
| 97-236, gnl|canFam2|chr20 (49132653-49132500) | |
| 97-236, gnl|danRer3|chr22 (14698481-14698340) | |
| 97-236, gnl|fr1|chrUn (18667076-18666924) | |
| 97-236, gnl|galGal2|chr28 (3647121-3646969) | |
| 97-236, gnl|hg17|chr19 (16364109-16364265) | |
| 97-236, gnl|Hg17|chr19 (16364254-16364115) | |
| 97-236, gnl|mm7|chr8 (70894575-70894729) | |
| 97-236, gnl|Mm7|chr8 (70894720-70894581) | |
| 97-236, gnl|monDom2|scaffold_100 (2935809-2935966) | |
| 97-236, gnl|oryCun1|scaffold_94165 (5347-5470) | |
| 97-236, gnl|panTro1|chr20 (17046449-17046605) | |
| 97-236, gnl|rheMac2|chr19 (15933052-15933208) | |
| 97-236, gnl|rn3|chr16 (17891512-17891358) | |
| 97-236, gnl|tetNig1|chr15_random (2686239-2686392) | |
| 379-648, gnl|bosTau2|chr7 (5615854-5615586) | |
| 379-648, gnl|canFam2|chr20 (49140473-49140218) | |
| 379-648, gnl|hg17|chr19 (16354784-16355035) | |
| 379-648, gnl|Hg17|chr19 (16355076-16354801) | |
| 379-648, gnl|loxAfr1|scaffold_21814 (19185-19446) | |
| 379-648, gnl|mm7|chr8 (70888067-70888302) | |
| 379-648, gnl|Mm7|chr8 (70888310-70888084) | |
| 379-648, gnl|oryCun1|scaffold_191490 (2482-2184) | |
| 379-648, gnl|panTro1|chr20 (17037114-17037366) | |
| 379-648, gnl|rheMac2|chr19 (15923853-15924113) | |
| 379-648, gnl|rn3|chr16 (17897725-17897488) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 97-236, gnl|bosTau2|chr7 (5626278-5626139) | |
| 97-236, gnl|canFam2|chr20 (49132653-49132500) | |
| 97-236, gnl|danRer3|chr22 (14698481-14698340) | |
| 97-236, gnl|fr1|chrUn (18667076-18666924) | |
| 97-236, gnl|galGal2|chr28 (3647121-3646969) | |
| 97-236, gnl|hg17|chr19 (16364109-16364265) | |
| 97-236, gnl|Hg17|chr19 (16364254-16364115) | |
| 97-236, gnl|mm7|chr8 (70894575-70894729) | |
| 97-236, gnl|Mm7|chr8 (70894720-70894581) | |
| 97-236, gnl|monDom2|scaffold_100 (2935809-2935966) | |
| 97-236, gnl|oryCun1|scaffold_94165 (5347-5470) | |
| 97-236, gnl|panTro1|chr20 (17046449-17046605) | |
| 97-236, gnl|rheMac2|chr19 (15933052-15933208) | |
| 97-236, gnl|rn3|chr16 (17891512-17891358) | |
| 97-236, gnl|tetNig1|chr15_random (2686239-2686392) | |
| 379-648, gnl|bosTau2|chr7 (5615854-5615586) | |
| 379-648, gnl|canFam2|chr20 (49140473-49140218) | |
| 379-648, gnl|hg17|chr19 (16354784-16355035) | |
| 379-648, gnl|Hg17|chr19 (16355076-16354801) | |
| 379-648, gnl|loxAfr1|scaffold_21814 (19185-19446) | |
| 379-648, gnl|mm7|chr8 (70888067-70888302) | |
| 379-648, gnl|Mm7|chr8 (70888310-70888084) | |
| 379-648, gnl|oryCun1|scaffold_191490 (2482-2184) | |
| 379-648, gnl|panTro1|chr20 (17037114-17037366) | |
| 379-648, gnl|rheMac2|chr19 (15923853-15924113) | |
| 379-648, gnl|rn3|chr16 (17897725-17897488) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nms (0.213858) |