Non-Coding RNA Search

Ss1.1-Pig2-119L24.5

Sequence:


               
               GGAGCGAGAGCCGAGAGGCTGGGAAGGATGGGACAGTCGCTCTCGCTGCCGCGGCGGACA
CCACATACACGGGCGCGGCCGGCTCCTCTCAGCCACGGAAGCTGAGGGCCCTCCCACCAC
ACCCGCCTCCCGCCCCCCACACCGCCCGCTGGAGGAGGGATAGCTGCGGTGGCCAATCAG
CGGCCTTACGGAGGCCGGATGGGCGGACTAAGGGTAGGGCAGAGTCGGGAGGCGAGGGCG
GCGGCGGGACTTCCTGTGACTGATGGTCCAACGCAGCCAATGGACAGCGGGGAGATGACC
TCATTGCCGAGGGTAGTCTGGAACTGGCGGAGAGGCGACAAGGAGGTGGGAGGAGGTCGG
AGAAGAGCCGGAGGCGGGGCCCTTGGGCCTTAAAGAGGCCACAGCCCATTGGTCAGCCAG
TCATGGGCTGGGCGGCGGACCCGACCAGACTTGGCCAAGTAGCCAAGGGGTCAATGCCAC
AGGCTCTTACTGCATTAATCCTCCCGACCCCATCACAATCCTTCTGGGGGGTTCAAGGCT
CCCCGCCTGGGGCTCATAAATCAATTACTTACTTTCACGCTTCCCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGCGAGAGCCGAGAGGCTGGGAAGGATGGGACAGTCGCTCTCGCTGCCGCGGCGGACA
CCACATACACGGGCGCGGCCGGCTCCTCTCAGCCACGGAAGCTGAGGGCCCTCCCACCAC
ACCCGCCTCCCGCCCCCCACACCGCCCGCTGGAGGAGGGATAGCTGCGGTGGCCAATCAG
CGGCCTTACGGAGGCCGGATGGGCGGACTAAGGGTAGGGCAGAGTCGGGAGGCGAGGGCG
GCGGCGGGACTTCCTGTGACTGATGGTCCAACGCAGCCAATGGACAGCGGGGAGATGACC
TCATTGCCGAGGGTAGTCTGGAACTGGCGGAGAGGCGACAAGGAGGTGGGAGGAGGTCGG
AGAAGAGCCGGAGGCGGGGCCCTTGGGCCTTAAAGAGGCCACAGCCCATTGGTCAGCCAG
TCATGGGCTGGGCGGCGGACCCGACCAGACTTGGCCAAGTAGCCAAGGGGTCAATGCCAC
AGGCTCTTACTGCATTAATCCTCCCGACCCCATCACAATCCTTCTGGGGGGTTCAAGGCT
CCCCGCCTGGGGCTCATAAATCAATTACTTACTTTCACGCTTCCCAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               103-588, gnl|bosTau2|chr5 (70660581-70661086)
               

               
               103-588, gnl|Hg17|chr22 (39357215-39357707)
               

               
               103-588, gnl|Mm7|chr15 (81275224-81275713)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               103-588, gnl|bosTau2|chr5 (70660581-70661086)
               

               
               103-588, gnl|Hg17|chr22 (39357215-39357707)
               

               
               103-588, gnl|Mm7|chr15 (81275224-81275713)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	103-588, gnl\|bosTau2\|chr5 (70660581-70661086)
	103-588, gnl\|Hg17\|chr22 (39357215-39357707)
	103-588, gnl\|Mm7\|chr15 (81275224-81275713)