Non-Coding RNA Search

Ss1.1-Pig2-11L11.5

Sequence:


               
               GCCCACGCGTCCGGCAGATTTTCTGGTATCTCTTTTTTAGCTATGAAGATACCATCTTAT
CAGAGACCTTCCATTTGCCTATTCATTAGGATAAAAATCTTTGCTCTGATTTACTATAGT
GTGAAAGATTATTTGGAAGCTGATTAGTCAAGTCTTATGCTAAAGATGCATTTGATCATT
TTCATGTGTAAACATGTTGCCTTATTGCAGTTATAATTGTTTTCCTTTCCTTCATAATGC
CTAAGTTTTCTTAACTTTGAGTAACAGTGAAGTTCATTTATATATGTCCATACCAAGAAA
ACCTCAGTGCAAATGATCTGATAGGCGCCTGGGTCTATAGCCCTACAAATCTTTCCTTCT
TTTATTAGTAGAAAAATATATATAGTATTGGAATGTTCTTATTCTTTTCTAAATCCTAAT
TACTTGTTTAATTATTTTAAGATGATTTTAAGTATACCAATGATCAGTACATTTGATTTA
TTATTTTTGCCTAACATGACAATATTTCTCTTGTGCTTCTTGTTTGTCGGTTAGATTTGT
TAATGAAATCATTAAGATCACCACTTTCATACACTTTTGTTACACTTCACGTATTTCGAA
GTGCATTTATTTTACTTAGCATTTTGTAACTTGAATAACTTTACCAAATGAATTCCTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCACGCGTCCGGCAGATTTTCTGGTATCTCTTTTTTAGCTATGAAGATACCATCTTAT
CAGAGACCTTCCATTTGCCTATTCATTAGGATAAAAATCTTTGCTCTGATTTACTATAGT
GTGAAAGATTATTTGGAAGCTGATTAGTCAAGTCTTATGCTAAAGATGCATTTGATCATT
TTCATGTGTAAACATGTTGCCTTATTGCAGTTATAATTGTTTTCCTTTCCTTCATAATGC
CTAAGTTTTCTTAACTTTGAGTAACAGTGAAGTTCATTTATATATGTCCATACCAAGAAA
ACCTCAGTGCAAATGATCTGATAGGCGCCTGGGTCTATAGCCCTACAAATCTTTCCTTCT
TTTATTAGTAGAAAAATATATATAGTATTGGAATGTTCTTATTCTTTTCTAAATCCTAAT
TACTTGTTTAATTATTTTAAGATGATTTTAAGTATACCAATGATCAGTACATTTGATTTA
TTATTTTTGCCTAACATGACAATATTTCTCTTGTGCTTCTTGTTTGTCGGTTAGATTTGT
TAATGAAATCATTAAGATCACCACTTTCATACACTTTTGTTACACTTCACGTATTTCGAA
GTGCATTTATTTTACTTAGCATTTTGTAACTTGAATAACTTTACCAAATGAATTCCTTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               14-652, gnl|bosTau2|chr14 (45721236-45721882)
               

               
               14-652, gnl|Hg17|chr8 (91705777-91705092)
               

               
               14-652, gnl|Mm7|chr4 (15211757-15212345)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-652, gnl|bosTau2|chr14 (45721236-45721882)
               

               
               14-652, gnl|Hg17|chr8 (91705777-91705092)
               

               
               14-652, gnl|Mm7|chr4 (15211757-15212345)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lin (0.145603)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)

	14-652, gnl\|bosTau2\|chr14 (45721236-45721882)
	14-652, gnl\|Hg17\|chr8 (91705777-91705092)
	14-652, gnl\|Mm7\|chr4 (15211757-15212345)