Non-Coding RNA Search

Ss1.1-Pig2-11P11.5

Sequence:


               
               TTAGGAAGTGCCATACGGTTATAGTAAACCACCCCCCATTCACCTAATCCTTCTTTGAAT
TAAAAATGGATTTTCCAGGAAAAAAAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCT
TAGGGAAGGTATTGTGAAAAGTATTAGAAATCTTGAGATCAGTATCTATTTTATGATCAG
GAAAAAATACTGTTTTGTACATTTCTGACAGTTACGCAAAAGCCCGTTCAAGCAAGCTAA
TCACAGCCTTGTAAATAGAAGGCAGTTGTTTGCAATGAGTTTTTCCTTAAGTAAGTGTGA
TTTTTAAAAATATTCTGTGGTTCTCATCTAGTGTGGTTGTTGAGAGGATTTCAAATTCAG
TGATATAGCTTAGAGCGGCTGAAGGGTTTATTTTTAATGTATATATGATAACTTGCAGTT
GGCCTGCCCCCCCCCCAAGTTCATTCTGTGAGAGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAGGAAGTGCCATACGGTTATAGTAAACCACCCCCCATTCACCTAATCCTTCTTTGAAT
TAAAAATGGATTTTCCAGGAAAAAAAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCT
TAGGGAAGGTATTGTGAAAAGTATTAGAAATCTTGAGATCAGTATCTATTTTATGATCAG
GAAAAAATACTGTTTTGTACATTTCTGACAGTTACGCAAAAGCCCGTTCAAGCAAGCTAA
TCACAGCCTTGTAAATAGAAGGCAGTTGTTTGCAATGAGTTTTTCCTTAAGTAAGTGTGA
TTTTTAAAAATATTCTGTGGTTCTCATCTAGTGTGGTTGTTGAGAGGATTTCAAATTCAG
TGATATAGCTTAGAGCGGCTGAAGGGTTTATTTTTAATGTATATATGATAACTTGCAGTT
GGCCTGCCCCCCCCCCAAGTTCATTCTGTGAGAGCG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-455, gnl|bosTau2|chr21 (5753982-5754446)
               

               
               1-455, gnl|Hg17|chr15 (94683252-94683718)
               

               
               1-455, gnl|Mm7|chr7 (66208980-66208489)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-455, gnl|bosTau2|chr21 (5753982-5754446)
               

               
               1-455, gnl|Hg17|chr15 (94683252-94683718)
               

               
               1-455, gnl|Mm7|chr7 (66208980-66208489)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nlu (0.191681)
               

               
               liv (0.146284)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)
               

               
               liv (0.146284)

	1-455, gnl\|bosTau2\|chr21 (5753982-5754446)
	1-455, gnl\|Hg17\|chr15 (94683252-94683718)
	1-455, gnl\|Mm7\|chr7 (66208980-66208489)