Non-Coding RNA Search

Ss1.1-Pig2-121F10.5

Sequence:


               
               AGGTTCTGGCCGGGAGGCCGAGGGCGGAGGCGGGCGCCACGCTGTGCCCGGTGCCCACGG
CCGGGGCTGCCCGCTGAGCGCCGGCGCAGGCAGCGTGCTCGCAGGACCGAGCCTCAGAGC
CGCGGAAACCACTGGAGGGAAGACACACACCGCATTCCACCCGCCTGGGGAAGGGGCTCC
TTCTGGCCATGTCTCCTGTAGCCGCCGCCGAGTCAGATGGGGTCCACCGAGACAGGCATG
TCAGCAAGCTCATCTTCTTCCTTTTTGTCATGGGCGCCATCCTGCTGTGCGTGGGAGTCC
TGCTCTCCATCTTCGGGTTCCAGGCGTGCCAGTATGAAACCCTCCCAGACTGCAGCATGG
TGCTGAAGATCGCCGGGCCCGCGTGTGCCGTGGTCGGGCTGGGGGCTGTGATCCTGGCCC
GCTCCCGGGCACGACTTCAGCAAAGTGAGGGGCGTCTGCGAGGCAACCAGGGGGACTCCG
ACCGAGCCTTCCTCTGCGGGGAGAGCCGCCAGTTTGTCCAGTGTCTCATCTTTGGGTTTC
TGTTTCTGACGAGCGGTATGCTCATCAGCGTCCTGGGCATTTGGGTTCCCGGGTGTGGCT
CAGACTGGGCGCAGGAACCGCTGAATGAGACAGACACTGCTGACTCGGAGTCCCAGATCT
GTGGGTTCCTGTCCCTGCAGATCTTGGGACCCTTGATCGTGCTTGTGGGACTGTGTTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGTTCTGGCCGGGAGGCCGAGGGCGGAGGCGGGCGCCACGCTGTGCCCGGTGCCCACGG
CCGGGGCTGCCCGCTGAGCGCCGGCGCAGGCAGCGTGCTCGCAGGACCGAGCCTCAGAGC
CGCGGAAACCACTGGAGGGAAGACACACACCGCATTCCACCCGCCTGGGGAAGGGGCTCC
TTCTGGCCATGTCTCCTGTAGCCGCCGCCGAGTCAGATGGGGTCCACCGAGACAGGCATG
TCAGCAAGCTCATCTTCTTCCTTTTTGTCATGGGCGCCATCCTGCTGTGCGTGGGAGTCC
TGCTCTCCATCTTCGGGTTCCAGGCGTGCCAGTATGAAACCCTCCCAGACTGCAGCATGG
TGCTGAAGATCGCCGGGCCCGCGTGTGCCGTGGTCGGGCTGGGGGCTGTGATCCTGGCCC
GCTCCCGGGCACGACTTCAGCAAAGTGAGGGGCGTCTGCGAGGCAACCAGGGGGACTCCG
ACCGAGCCTTCCTCTGCGGGGAGAGCCGCCAGTTTGTCCAGTGTCTCATCTTTGGGTTTC
TGTTTCTGACGAGCGGTATGCTCATCAGCGTCCTGGGCATTTGGGTTCCCGGGTGTGGCT
CAGACTGGGCGCAGGAACCGCTGAATGAGACAGACACTGCTGACTCGGAGTCCCAGATCT
GTGGGTTCCTGTCCCTGCAGATCTTGGGACCCTTGATCGTGCTTGTGGGACTGTGTTTCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|62460594|ref|NP_001014951.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|62460594|ref|NP_001014951.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               115-720, gnl|bosTau2|chr20 (5523020-5523624)
               

               
               115-720, gnl|Hg17|chr5 (72454886-72455488)
               

               
               115-720, gnl|Mm7|chr13 (95762582-95761974)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               115-720, gnl|bosTau2|chr20 (5523020-5523624)
               

               
               115-720, gnl|Hg17|chr5 (72454886-72455488)
               

               
               115-720, gnl|Mm7|chr13 (95762582-95761974)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               mcp (0.170648)
               

               
               nco (0.161734)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)
               

               
               nco (0.161734)
               

               
               eje (0.0988338)

	115-720, gnl\|bosTau2\|chr20 (5523020-5523624)
	115-720, gnl\|Hg17\|chr5 (72454886-72455488)
	115-720, gnl\|Mm7\|chr13 (95762582-95761974)