Non-Coding RNA Search

Ss1.1-Pig2-121G15.5

Sequence:


               
               TACTGCAGCTGGCCGGACATGGAGTCCCGGCCGAGCCTGCCGGCGTCCTGGGCTTCCTGG
ACGAGGTGAACCGGGCGCAGAACAGCATGCCAGGGGCCGGACCCGTGGTGGTGCACTGCA
GGTGCGAGCCGGGACAGGGCGTGGTGGGGCCAGCGGCACAGTGCGACTGGGGAAGGGGTC
AGAGCTTTGTCCCATCAGCTGGCCACAGGCCTCCCTGGTCCACCTCCACAGCGCGGGCAT
CGGACGCACTGGCACCATTATTGTGATTGACATCCTAGTGGACATCGTTCGCAGGCAGGG
GCTGGACTGCGATATCGACGTCCCCAAGACGATCCAGCTGGTGCGGCGACAGCGCTCCGG
GATGGTGCAGACGGAGGCGCAGTACAAGTTCGTGTACCTGGCGCTGCAGCGGTACATCCA
GGGACAGCAGCTGCGCCTGCGCGAGCAGGAGGCGGGGCCGGTCCGGGGCGGAGCCAGCGC
GGGCATCACCATGGTGACCAGCGGTCCCTCCCCTCAGCGCGAGCCGCCTAAGGAGCACGA
CTCTCTGAACGTGGGCGCCTTGCCAGCCGACCGCGGCTGTAGCCCGGGACCCGCGCCGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACTGCAGCTGGCCGGACATGGAGTCCCGGCCGAGCCTGCCGGCGTCCTGGGCTTCCTGG
ACGAGGTGAACCGGGCGCAGAACAGCATGCCAGGGGCCGGACCCGTGGTGGTGCACTGCA
GGTGCGAGCCGGGACAGGGCGTGGTGGGGCCAGCGGCACAGTGCGACTGGGGAAGGGGTC
AGAGCTTTGTCCCATCAGCTGGCCACAGGCCTCCCTGGTCCACCTCCACAGCGCGGGCAT
CGGACGCACTGGCACCATTATTGTGATTGACATCCTAGTGGACATCGTTCGCAGGCAGGG
GCTGGACTGCGATATCGACGTCCCCAAGACGATCCAGCTGGTGCGGCGACAGCGCTCCGG
GATGGTGCAGACGGAGGCGCAGTACAAGTTCGTGTACCTGGCGCTGCAGCGGTACATCCA
GGGACAGCAGCTGCGCCTGCGCGAGCAGGAGGCGGGGCCGGTCCGGGGCGGAGCCAGCGC
GGGCATCACCATGGTGACCAGCGGTCCCTCCCCTCAGCGCGAGCCGCCTAAGGAGCACGA
CTCTCTGAACGTGGGCGCCTTGCCAGCCGACCGCGGCTGTAGCCCGGGACCCGCGCCGTC

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               1-300, gnl|bosTau2|chr16 (41227201-41226905)
               

               
               1-300, gnl|Hg17|chr1 (1043913-1044292)
               

               
               1-300, gnl|Mm7|chr4 (155125456-155125191)
               


               
               339-600, gnl|bosTau2|chr16 (41226709-41226448)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-300, gnl|bosTau2|chr16 (41227201-41226905)
               

               
               1-300, gnl|Hg17|chr1 (1043913-1044292)
               

               
               1-300, gnl|Mm7|chr4 (155125456-155125191)
               


               
               339-600, gnl|bosTau2|chr16 (41226709-41226448)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-300, gnl\|bosTau2\|chr16 (41227201-41226905)
	1-300, gnl\|Hg17\|chr1 (1043913-1044292)
	1-300, gnl\|Mm7\|chr4 (155125456-155125191)

	339-600, gnl\|bosTau2\|chr16 (41226709-41226448)