Non-Coding RNA Search

Ss1.1-Pig2-121H07.5

Sequence:


               
               CTGCAGTCTATGGGCTGGTGGTGGCAGGTCTGTTCTGGTCCTAGGAGCTATCATTGGTGA
TTGGGTGGATAAGAATGCCAGACTTAAAGGTGAGTGGTGTGTTTGTGGGGCCAGTACCTG
AGCTAGAGAGAACCACTGTGACAAACCCACTGGGCATCTGCACACAGCCCCTGAGTGATG
AGTGCTCATGGGTAGCACCTCTGCATGGAGGGTCTGGGGCTCCTGCACAAAGTTGGGATG
CCAGGACATTGAGTTTTTAGATTTTTTTTTTTGGTATCTTTGGCTATTTTTAAATTTCAA
ATGTTAATGATTAACACCATAGAACTTTTCTGGGAACCATGTTAAACATTAAAAGTTTGC
TTAACTCTGGCATCCTTTTTAACCATGACTTGCCCTGGAGTCCATTTAATAAGATGTTCC
TGGGACAGCTTGAACATCTGTCCACTGGGTGTCTGTGTTTCATATAAATGGATGTATCGG
GGAACTGAAAACTATGGAATCAAGAAAAAAAATCTGTTTCTGAATCACAGCTGAATTATA
AATATTTGAGGGAAAAAGAAATGATAATATATTGGCACTTATTCTAGAGCATTAATACTG
AAATCATTAAGTATTATATAGAAAAGAGAGGAAGTGAATGAACAGTTCAATTATTCAGAA
TATAAGGCAGAGTTCCCTTATGGCTCAGCGGGTTAAGAATCTGGCATTGTCACTGCTGTG
GCTCTGGCTACAACTGTGGTAATGGGTTCGATCCCTGGCCCAGGAACTTCCACAGGCCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCAGTCTATGGGCTGGTGGTGGCAGGTCTGTTCTGGTCCTAGGAGCTATCATTGGTGA
TTGGGTGGATAAGAATGCCAGACTTAAAGGTGAGTGGTGTGTTTGTGGGGCCAGTACCTG
AGCTAGAGAGAACCACTGTGACAAACCCACTGGGCATCTGCACACAGCCCCTGAGTGATG
AGTGCTCATGGGTAGCACCTCTGCATGGAGGGTCTGGGGCTCCTGCACAAAGTTGGGATG
CCAGGACATTGAGTTTTTAGATTTTTTTTTTTGGTATCTTTGGCTATTTTTAAATTTCAA
ATGTTAATGATTAACACCATAGAACTTTTCTGGGAACCATGTTAAACATTAAAAGTTTGC
TTAACTCTGGCATCCTTTTTAACCATGACTTGCCCTGGAGTCCATTTAATAAGATGTTCC
TGGGACAGCTTGAACATCTGTCCACTGGGTGTCTGTGTTTCATATAAATGGATGTATCGG
GGAACTGAAAACTATGGAATCAAGAAAAAAAATCTGTTTCTGAATCACAGCTGAATTATA
AATATTTGAGGGAAAAAGAAATGATAATATATTGGCACTTATTCTAGAGCATTAATACTG
AAATCATTAAGTATTATATAGAAAAGAGAGGAAGTGAATGAACAGTTCAATTATTCAGAA
TATAAGGCAGAGTTCCCTTATGGCTCAGCGGGTTAAGAATCTGGCATTGTCACTGCTGTG
GCTCTGGCTACAACTGTGGTAATGGGTTCGATCCCTGGCCCAGGAACTTCCACAGGCCAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-628, gnl|bosTau2|chr2 (4189313-4188677)
               

               
               3-628, gnl|Hg17|chr2 (190265480-190264801)
               

               
               3-628, gnl|Mm7|chr1 (46157894-46157180)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-628, gnl|bosTau2|chr2 (4189313-4188677)
               

               
               3-628, gnl|Hg17|chr2 (190265480-190264801)
               

               
               3-628, gnl|Mm7|chr1 (46157894-46157180)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cut (0.169924)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)

	3-628, gnl\|bosTau2\|chr2 (4189313-4188677)
	3-628, gnl\|Hg17\|chr2 (190265480-190264801)
	3-628, gnl\|Mm7\|chr1 (46157894-46157180)