Non-Coding RNA Search

Ss1.1-Pig2-121L16.5

Sequence:


               
               GCGGCCGCGGAGAAACGTGACACACCAGCCCGCTCGGAGGGGTTTCGGACAGAAGGGAAC
GAGCTGCGCCGCGTCGTCCGCCTCCCAGCGCGCCGCGGGCACTTCTCCCGGGCCTCCCCG
AACTCTCCCGCGACCTCTGCGCGCCCTCCGGCCGCCCTCCCCGCCCCGGCTCCGGACAAC
TTCAGGGGTGGGGTGCAAAGAAAGTTTGCGTCTGCTGCCGCCGCCTCCTGCCTCGGCCTA
GGAGGCTCGCCGCCCGCGCCCGCCCGCTCGGCCTTGCCCGGGACCGCGTCCTGCCCGAGA
CCGCCACCATGAACAAGCTGTACATTGGCAACCTCAACGAGAGCGTGACCCCCGCGGACT
TGGAGAAAGTGTTTGCGGAGCACAAGATCTCCTACAGCGGCCAGTTCTTGGTCAAATCCG
GCTATGCCTTCGTGGACTGCCCCGACGAGCACTGGGCGATGAAGGCCATCGAAACTTTCT
CCGGGAAAGTGGAACTGCAAGGAAAACGCCTAGAGATTGAACACTCCGTTCCCAAAAAAC
AAAGGAGTCGGAAAATACAGATCCGAAATATTCCACCCCAGCTGCGATGGGAAGTACTGG
ACAGCCTGCTGGCTCAGTATGGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCCGCGGAGAAACGTGACACACCAGCCCGCTCGGAGGGGTTTCGGACAGAAGGGAAC
GAGCTGCGCCGCGTCGTCCGCCTCCCAGCGCGCCGCGGGCACTTCTCCCGGGCCTCCCCG
AACTCTCCCGCGACCTCTGCGCGCCCTCCGGCCGCCCTCCCCGCCCCGGCTCCGGACAAC
TTCAGGGGTGGGGTGCAAAGAAAGTTTGCGTCTGCTGCCGCCGCCTCCTGCCTCGGCCTA
GGAGGCTCGCCGCCCGCGCCCGCCCGCTCGGCCTTGCCCGGGACCGCGTCCTGCCCGAGA
CCGCCACCATGAACAAGCTGTACATTGGCAACCTCAACGAGAGCGTGACCCCCGCGGACT
TGGAGAAAGTGTTTGCGGAGCACAAGATCTCCTACAGCGGCCAGTTCTTGGTCAAATCCG
GCTATGCCTTCGTGGACTGCCCCGACGAGCACTGGGCGATGAAGGCCATCGAAACTTTCT
CCGGGAAAGTGGAACTGCAAGGAAAACGCCTAGAGATTGAACACTCCGTTCCCAAAAAAC
AAAGGAGTCGGAAAATACAGATCCGAAATATTCCACCCCAGCTGCGATGGGAAGTACTGG
ACAGCCTGCTGGCTCAGTATGGAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|30411063|gb|AAH51296.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|30411063|gb|AAH51296.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-487, gnl|bosTau2|chr19 (30340442-30339956)
               

               
               1-487, gnl|Hg17|chr17 (44429792-44430285)
               

               
               1-487, gnl|Mm7|chr11 (96114991-96114494)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-487, gnl|bosTau2|chr19 (30340442-30339956)
               

               
               1-487, gnl|Hg17|chr17 (44429792-44430285)
               

               
               1-487, gnl|Mm7|chr11 (96114991-96114494)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ese (0.126502)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	1-487, gnl\|bosTau2\|chr19 (30340442-30339956)
	1-487, gnl\|Hg17\|chr17 (44429792-44430285)
	1-487, gnl\|Mm7\|chr11 (96114991-96114494)