Non-Coding RNA Search

Ss1.1-Pig2-122E18.5

Sequence:


               
               AAGGTTTAGGGAACTTGGTGGAACGCAACTTCGGAAGCGCCAAGGAAAGAGCGGTTCCTC
GCCAGCCAAGTTGGCCTGCGCTCCTTCCAGGGCTGGGCCTAGGGCCAGCCCTGCATCCAC
CTGCTCTCCCTGCTTTGGTGCAAATGTAAGAAATTTGTCCGAAATCTTGTTAGGTCAGGC
CGGGCTGCCCGCCTGGAAGCGAAGTTTGGGTTTTTCGCAGCCCCAGTCCAGGAATAATCC
CAATTCGAGGAGCCGGAACCTTCTGCCCCAAACGGCAAGCTCCCCACACCTCTGCCTCTG
GATTTTCCTATCTGTCTGCTCCACAGATCCTGAAAGCGTATGTTTTATACCACCACCTCT
GAATCCCAAGTCTGCCCCCGCCGTGTTACTGGGCGCCCAGGACCTGTGATTGCGCTCATC
GCAGGACTTTTATTCAAGAGGTTCGTCCAGGAGTTTTGATTGTATCGGAACATAATGTGA
AAGCAAAATTGAAATAAACGACTTCGTTTTGAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGGTTTAGGGAACTTGGTGGAACGCAACTTCGGAAGCGCCAAGGAAAGAGCGGTTCCTC
GCCAGCCAAGTTGGCCTGCGCTCCTTCCAGGGCTGGGCCTAGGGCCAGCCCTGCATCCAC
CTGCTCTCCCTGCTTTGGTGCAAATGTAAGAAATTTGTCCGAAATCTTGTTAGGTCAGGC
CGGGCTGCCCGCCTGGAAGCGAAGTTTGGGTTTTTCGCAGCCCCAGTCCAGGAATAATCC
CAATTCGAGGAGCCGGAACCTTCTGCCCCAAACGGCAAGCTCCCCACACCTCTGCCTCTG
GATTTTCCTATCTGTCTGCTCCACAGATCCTGAAAGCGTATGTTTTATACCACCACCTCT
GAATCCCAAGTCTGCCCCCGCCGTGTTACTGGGCGCCCAGGACCTGTGATTGCGCTCATC
GCAGGACTTTTATTCAAGAGGTTCGTCCAGGAGTTTTGATTGTATCGGAACATAATGTGA
AAGCAAAATTGAAATAAACGACTTCGTTTTGAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               70-510, gnl|bosTau2|chr18 (19514867-19515301)
               

               
               70-510, gnl|Hg17|chr16 (47869789-47869339)
               

               
               70-510, gnl|Mm7|chr8 (86059733-86059286)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               70-510, gnl|bosTau2|chr18 (19514867-19515301)
               

               
               70-510, gnl|Hg17|chr16 (47869789-47869339)
               

               
               70-510, gnl|Mm7|chr8 (86059733-86059286)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cbe (0.239234)
               

               
               fbs (0.175346)
               

               
               ecc (0.115035)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)
               

               
               fbs (0.175346)
               

               
               ecc (0.115035)

	70-510, gnl\|bosTau2\|chr18 (19514867-19515301)
	70-510, gnl\|Hg17\|chr16 (47869789-47869339)
	70-510, gnl\|Mm7\|chr8 (86059733-86059286)