Non-Coding RNA Search

Ss1.1-Pig2-122G17.5

Sequence:


               
               GCACCGTGCTCCAGGAAAGATCCCAAGGTCCTGACACCATGAGGAAGCACCTGGGTGGAC
GTAGGTGGGCCATTGTCTGCATCCTGCTCTTCAGCCAGCTCTCCGAAGTCAAGGCGAGGG
GCATAAAGCACAGAATCAAGTGGAACCGGAAGGCCCTGCCAAGTACCTCCCAGGTCACAG
AGGCCCACACAGCGGAGATGCGCCCAGGGGCTTTCATTAAGCAAGGTCGAAAGCTGGATA
TTGACTTTGGGGCAGAGGGCAATAGGTACTACGAGGCCAACTATTGGCGGTTCCCTGATG
GGATCCATTACAACGGCTGCTCCGAGGTCAACGTCACCAAGGAGAAGTTTGTCACCAGCT
GCATCAACACCACCCAGGCGGCGAACCAGGAGGAACTGTCCCACGAGAAACCGGACAATA
AGCTTTACCAGCGGGTCCTGTGGCGGCTGATCAGGGAGCTCTGCTCCATCAAGCACTGTG
ATTTTTGGTTGGAAAGGGGAGCGGGACTTCGGGTCACTATGGACCAGCCCATGATGCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCACCGTGCTCCAGGAAAGATCCCAAGGTCCTGACACCATGAGGAAGCACCTGGGTGGAC
GTAGGTGGGCCATTGTCTGCATCCTGCTCTTCAGCCAGCTCTCCGAAGTCAAGGCGAGGG
GCATAAAGCACAGAATCAAGTGGAACCGGAAGGCCCTGCCAAGTACCTCCCAGGTCACAG
AGGCCCACACAGCGGAGATGCGCCCAGGGGCTTTCATTAAGCAAGGTCGAAAGCTGGATA
TTGACTTTGGGGCAGAGGGCAATAGGTACTACGAGGCCAACTATTGGCGGTTCCCTGATG
GGATCCATTACAACGGCTGCTCCGAGGTCAACGTCACCAAGGAGAAGTTTGTCACCAGCT
GCATCAACACCACCCAGGCGGCGAACCAGGAGGAACTGTCCCACGAGAAACCGGACAATA
AGCTTTACCAGCGGGTCCTGTGGCGGCTGATCAGGGAGCTCTGCTCCATCAAGCACTGTG
ATTTTTGGTTGGAAAGGGGAGCGGGACTTCGGGTCACTATGGACCAGCCCATGATGCTCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|57164295|ref|NP_001009261.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|57164295|ref|NP_001009261.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               26-540, gnl|bosTau2|chr13 (31432213-31432727)
               

               
               26-540, gnl|Hg17|chr20 (4653185-4653693)
               

               
               26-540, gnl|Mm7|chr2 (131693860-131694373)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               26-540, gnl|bosTau2|chr13 (31432213-31432727)
               

               
               26-540, gnl|Hg17|chr20 (4653185-4653693)
               

               
               26-540, gnl|Mm7|chr2 (131693860-131694373)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eep (0.367692)
               

               
               eje (0.0988338)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.367692)
               

               
               eje (0.0988338)

	26-540, gnl\|bosTau2\|chr13 (31432213-31432727)
	26-540, gnl\|Hg17\|chr20 (4653185-4653693)
	26-540, gnl\|Mm7\|chr2 (131693860-131694373)