Non-Coding RNA Search

Ss1.1-Pig2-122P16.5

Sequence:


               
               TGGGAATGGAGGATTACGGTATCGCAGAGGCACGGGGAGCTCTTTCCACCAAGACCTCCT
GATGGAAGTGGGTGAATCAAGCCCCAGGGGCTGCCTGCAAACGAGGCCCAGAGTAATGGA
GCGTAATGGAGCCAAGCTCCTGGTTGAAGAGTTCAGTCCTGCTGCAGTAATAAATCAAGA
AGCCTTTACGGGAGGCCAGTCATGGGTCAGCGGGGAGCCATCCGCCAAACCTGGCTTTGT
GCGACTCCGGGGAGCTTTGTGGGTCCTGCTTTTAACCTGAGTGGGGGATTCAGGCCCAGT
CTTTTCTGGATTTCCTTGGAAAGGGCTGAGGGATGTAATTTGGATGGTTGTCGAGGTGAG
TCTTATAATGAGCTATTTATAATGAGTTTTTATGGCACTTGGAGCCTGGTGTTGCTAGAT
GTTACTTCAGAAATAATAACAGTATTATTATTTTTGCCGAGGACTTACTGTATTCCAGGC
CCATTATTCATCAAAATCATTAACAAGCAGCATTAATGGAGCGAGCATTTGTGGTAGAGC
AAACCCTTAAGCACTTTAGATACTTACCTTCCTAGACATTCCCAGAAGGAGGTTCCCAGA
ACTGAGGTTCAGCGCATTAGACCAGCTGTTCCGAGTAAGCTGCATGCAGGAAAACGGCAG
TTGAGGCTGAATTTTCACAGCAGTGCCTTTCTCCCCCTTTTAAAGCTGCAGGAAAAAGTG
CTCTGAGGAACAGCCCCAAGAAAGTGGGGCGAAGGGCAGAAAATAGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGGAATGGAGGATTACGGTATCGCAGAGGCACGGGGAGCTCTTTCCACCAAGACCTCCT
GATGGAAGTGGGTGAATCAAGCCCCAGGGGCTGCCTGCAAACGAGGCCCAGAGTAATGGA
GCGTAATGGAGCCAAGCTCCTGGTTGAAGAGTTCAGTCCTGCTGCAGTAATAAATCAAGA
AGCCTTTACGGGAGGCCAGTCATGGGTCAGCGGGGAGCCATCCGCCAAACCTGGCTTTGT
GCGACTCCGGGGAGCTTTGTGGGTCCTGCTTTTAACCTGAGTGGGGGATTCAGGCCCAGT
CTTTTCTGGATTTCCTTGGAAAGGGCTGAGGGATGTAATTTGGATGGTTGTCGAGGTGAG
TCTTATAATGAGCTATTTATAATGAGTTTTTATGGCACTTGGAGCCTGGTGTTGCTAGAT
GTTACTTCAGAAATAATAACAGTATTATTATTTTTGCCGAGGACTTACTGTATTCCAGGC
CCATTATTCATCAAAATCATTAACAAGCAGCATTAATGGAGCGAGCATTTGTGGTAGAGC
AAACCCTTAAGCACTTTAGATACTTACCTTCCTAGACATTCCCAGAAGGAGGTTCCCAGA
ACTGAGGTTCAGCGCATTAGACCAGCTGTTCCGAGTAAGCTGCATGCAGGAAAACGGCAG
TTGAGGCTGAATTTTCACAGCAGTGCCTTTCTCCCCCTTTTAAAGCTGCAGGAAAAAGTG
CTCTGAGGAACAGCCCCAAGAAAGTGGGGCGAAGGGCAGAAAATAGGC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-598, gnl|bosTau2|chr3 (72638667-72638077)
               

               
               1-598, gnl|Hg17|chr1 (41977375-41976489)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-598, gnl|bosTau2|chr3 (72638667-72638077)
               

               
               1-598, gnl|Hg17|chr1 (41977375-41976489)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               ecc (0.115035)

	1-598, gnl\|bosTau2\|chr3 (72638667-72638077)
	1-598, gnl\|Hg17\|chr1 (41977375-41976489)