Ss1.1-Pig2-123G23.5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCCGCCACACCAAGGCCTTAAAGCTCTATAAGGAGCTCTATGCCCGAGACAAACGCTTC CAGCAGTTTATCCGGAAAGTGACCCGCTCAGCCGTGCTGAAGCGCCATGGGGTACAGGAG TGCATCCTGCTGGTGACTCAGCGTATCACCAAGTACCCGGTGCTCATCAGCCGCATCCTG CAGCATACCCACGGGATCGAGGAGGAGCGCCAGGACCTGACGACGGCACTGGGGCTGGTA AAGGAGCTGCTGTCCAATGTGGACCAGGATGTACACGAGCTGGAGAAGGGGGCCCGCCTG CAGGAGATCTACAACCGCATGGACCCCAGGGCCCAGACCCCGGTGCCTGGCAAGGGCCCC TTTGGCCGAGAGGAGCTTCTGCGGCGCAAGCTCATTCACGATGGTTGCCTGCTCTGGAAG ACAGCAGCGGGGCGCTTCAAAGATGTGCTGATGCTGCTGATGACAGATGTGCTGGTGTTT CTCCAGGAGAAGGACCAGAAGTACATCTTTCCTGCCCTGGACAAGCCCTCGGTGGTATCA CTGCAGAATCTGATTGTGCGGGACATCGCCAACCAGGAGAAAGGGATGTTTCTGATCAGC GCGGCCCCCCCTGAGATGTATGAGGTCCACACAGCATCTCGGGATGACCGGAGCACCTGG ATCCGCGTTATTCAGCAGAGCGTGCGAGTATGCCCATCCAGGGAGGACTTCCCCCTGATT GAGACAGAGGATGAGGCTTATCTGCGGCGTATCAAGATGGAGCTGCAGCAGAAAGACCGG GCACTGGTGGAGCTGCTGCAGGAGAAAGTTGGGCTGTTTGCCGAGATGACCCATTTCCAG GTGGAAGAGGATGGCGGTGGTGGGATGCCCCTGCCCACTCTGCCCAGGGGCCTTTTCCGC TCTGAGTCCCTTGAGTCACCTCGTGGCGAGCGGCTGCTGCAGGATGCCATCCGTGAGGTG GAGGGCCTGAAAGACCTGCTGGTGGGGCCTGGAGTGGAGCTGCTCTTGACTTCCCGGGAA CCAGCCCTACCCGTGGAAACGGCCAGTGGTGGTAACACGAGTCCTGGGGTCACTGCCAAT GGCGAGGCCAGAACCTTCAATGGCTCGATAGAGCTCTGCAGAGCTGACTCAGACTCCAGC CAGAAGGATCGAAATGGAAACCAGCTGAGATCTCCCCAGGAGGAAGCGTTGCAGCGATTG GTCAATCTCTAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCCGCCACACCAAGGCCTTAAAGCTCTATAAGGAGCTCTATGCCCGAGACAAACGCTTC CAGCAGTTTATCCGGAAAGTGACCCGCTCAGCCGTGCTGAAGCGCCATGGGGTACAGGAG TGCATCCTGCTGGTGACTCAGCGTATCACCAAGTACCCGGTGCTCATCAGCCGCATCCTG CAGCATACCCACGGGATCGAGGAGGAGCGCCAGGACCTGACGACGGCACTGGGGCTGGTA AAGGAGCTGCTGTCCAATGTGGACCAGGATGTACACGAGCTGGAGAAGGGGGCCCGCCTG CAGGAGATCTACAACCGCATGGACCCCAGGGCCCAGACCCCGGTGCCTGGCAAGGGCCCC TTTGGCCGAGAGGAGCTTCTGCGGCGCAAGCTCATTCACGATGGTTGCCTGCTCTGGAAG ACAGCAGCGGGGCGCTTCAAAGATGTGCTGATGCTGCTGATGACAGATGTGCTGGTGTTT CTCCAGGAGAAGGACCAGAAGTACATCTTTCCTGCCCTGGACAAGCCCTCGGTGGTATCA CTGCAGAATCTGATTGTGCGGGACATCGCCAACCAGGAGAAAGGGATGTTTCTGATCAGC GCGGCCCCCCCTGAGATGTATGAGGTCCACACAGCATCTCGGGATGACCGGAGCACCTGG ATCCGCGTTATTCAGCAGAGCGTGCGAGTATGCCCATCCAGGGAGGACTTCCCCCTGATT GAGACAGAGGATGAGGCTTATCTGCGGCGTATCAAGATGGAGCTGCAGCAGAAAGACCGG GCACTGGTGGAGCTGCTGCAGGAGAAAGTTGGGCTGTTTGCCGAGATGACCCATTTCCAG GTGGAAGAGGATGGCGGTGGTGGGATGCCCCTGCCCACTCTGCCCAGGGGCCTTTTCCGC TCTGAGTCCCTTGAGTCACCTCGTGGCGAGCGGCTGCTGCAGGATGCCATCCGTGAGGTG GAGGGCCTGAAAGACCTGCTGGTGGGGCCTGGAGTGGAGCTGCTCTTGACTTCCCGGGAA CCAGCCCTACCCGTGGAAACGGCCAGTGGTGGTAACACGAGTCCTGGGGTCACTGCCAAT GGCGAGGCCAGAACCTTCAATGGCTCGATAGAGCTCTGCAGAGCTGACTCAGACTCCAGC CAGAAGGATCGAAATGGAAACCAGCTGAGATCTCCCCAGGAGGAAGCGTTGCAGCGATTG GTCAATCTCTAT |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 193-442, gnl|bosTau2|chr3 (10650097-10650346) | |
| 193-442, gnl|canFam2|chr7 (44812154-44811967) | |
| 193-442, gnl|danRer3|chr16 (2559702-2559522) | |
| 193-442, gnl|dasNov1|scaffold_142049 (132-315) | |
| 193-442, gnl|echTel1|scaffold_283020 (3845-3658) | |
| 193-442, gnl|fr1|chrUn (71174167-71174001) | |
| 193-442, gnl|hg17|chr1 (152744514-152744701) | |
| 193-442, gnl|Hg17|chr1 (152744774-152744525) | |
| 193-442, gnl|loxAfr1|scaffold_24471 (8418-8605) | |
| 193-442, gnl|mm7|chr3 (88749917-88749730) | |
| 193-442, gnl|Mm7|chr3 (88749655-88749904) | |
| 193-442, gnl|monDom2|scaffold_59 (1579816-1579629) | |
| 193-442, gnl|oryCun1|scaffold_185133 (5676-5492) | |
| 193-442, gnl|panTro1|chr1 (134685086-134685273) | |
| 193-442, gnl|rheMac2|chr1 (134542278-134542465) | |
| 193-442, gnl|rn3|chr2 (180713293-180713106) | |
| 193-442, gnl|tetNig1|chrUn_random (46842651-46842498) | |
| 193-442, gnl|xenTro1|scaffold_1952 (53875-54118) | |
| 519-692, gnl|bosTau2|chr3 (10652440-10652613) | |
| 519-692, gnl|canFam2|chr7 (44814656-44814453) | |
| 519-692, gnl|danRer3|chr16 (2562442-2562239) | |
| 519-692, gnl|dasNov1|scaffold_43953 (3903-3730) | |
| 519-692, gnl|echTel1|scaffold_283020 (6264-6058) | |
| 519-692, gnl|fr1|chrUn (71174977-71174769) | |
| 519-692, gnl|hg17|chr1 (152740570-152740776) | |
| 519-692, gnl|Hg17|chr1 (152740747-152740574) | |
| 519-692, gnl|loxAfr1|scaffold_24471 (5885-6094) | |
| 519-692, gnl|mm7|chr3 (88753302-88753100) | |
| 519-692, gnl|Mm7|chr3 (88753123-88753296) | |
| 519-692, gnl|monDom2|scaffold_59 (1581623-1581412) | |
| 519-692, gnl|oryCun1|scaffold_185133 (9120-8914) | |
| 519-692, gnl|panTro1|chr1 (134681143-134681349) | |
| 519-692, gnl|rheMac2|chr1 (134538045-134538251) | |
| 519-692, gnl|rn3|chr2 (180716691-180716488) | |
| 519-692, gnl|tetNig1|chrUn_random (46843147-46842974) | |
| 519-692, gnl|xenTro1|scaffold_4857 (228-68) | |
| 736-965, gnl|bosTau2|chr3 (10655502-10655732) | |
| 736-965, gnl|Hg17|chr1 (152735715-152735485) | |
| 736-965, gnl|Mm7|chr3 (88756196-88756434) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 193-442, gnl|bosTau2|chr3 (10650097-10650346) | |
| 193-442, gnl|canFam2|chr7 (44812154-44811967) | |
| 193-442, gnl|danRer3|chr16 (2559702-2559522) | |
| 193-442, gnl|dasNov1|scaffold_142049 (132-315) | |
| 193-442, gnl|echTel1|scaffold_283020 (3845-3658) | |
| 193-442, gnl|fr1|chrUn (71174167-71174001) | |
| 193-442, gnl|hg17|chr1 (152744514-152744701) | |
| 193-442, gnl|Hg17|chr1 (152744774-152744525) | |
| 193-442, gnl|loxAfr1|scaffold_24471 (8418-8605) | |
| 193-442, gnl|mm7|chr3 (88749917-88749730) | |
| 193-442, gnl|Mm7|chr3 (88749655-88749904) | |
| 193-442, gnl|monDom2|scaffold_59 (1579816-1579629) | |
| 193-442, gnl|oryCun1|scaffold_185133 (5676-5492) | |
| 193-442, gnl|panTro1|chr1 (134685086-134685273) | |
| 193-442, gnl|rheMac2|chr1 (134542278-134542465) | |
| 193-442, gnl|rn3|chr2 (180713293-180713106) | |
| 193-442, gnl|tetNig1|chrUn_random (46842651-46842498) | |
| 193-442, gnl|xenTro1|scaffold_1952 (53875-54118) | |
| 519-692, gnl|bosTau2|chr3 (10652440-10652613) | |
| 519-692, gnl|canFam2|chr7 (44814656-44814453) | |
| 519-692, gnl|danRer3|chr16 (2562442-2562239) | |
| 519-692, gnl|dasNov1|scaffold_43953 (3903-3730) | |
| 519-692, gnl|echTel1|scaffold_283020 (6264-6058) | |
| 519-692, gnl|fr1|chrUn (71174977-71174769) | |
| 519-692, gnl|hg17|chr1 (152740570-152740776) | |
| 519-692, gnl|Hg17|chr1 (152740747-152740574) | |
| 519-692, gnl|loxAfr1|scaffold_24471 (5885-6094) | |
| 519-692, gnl|mm7|chr3 (88753302-88753100) | |
| 519-692, gnl|Mm7|chr3 (88753123-88753296) | |
| 519-692, gnl|monDom2|scaffold_59 (1581623-1581412) | |
| 519-692, gnl|oryCun1|scaffold_185133 (9120-8914) | |
| 519-692, gnl|panTro1|chr1 (134681143-134681349) | |
| 519-692, gnl|rheMac2|chr1 (134538045-134538251) | |
| 519-692, gnl|rn3|chr2 (180716691-180716488) | |
| 519-692, gnl|tetNig1|chrUn_random (46843147-46842974) | |
| 519-692, gnl|xenTro1|scaffold_4857 (228-68) | |
| 736-965, gnl|bosTau2|chr3 (10655502-10655732) | |
| 736-965, gnl|Hg17|chr1 (152735715-152735485) | |
| 736-965, gnl|Mm7|chr3 (88756196-88756434) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.20816) |