Non-Coding RNA Search

Ss1.1-Pig2-123H15.5

Sequence:


               
               AACCCTGCCCGCTTCGCCGCGGGCGGGGGGGGAACCTGCATGATCCTCACCTGAGGGGAA
TCGCTGGAGGCACCCAGCCCCGGACGAGGTCACCGGTTGGAATTGCTGTGACCTGCCTGC
CCGCCTCCCGCGCCAGGCAGCAGATCCCAGGGTGGGTTCACTCCATCCCCAGGGCTCGCA
CTGAGCTTGGTGCCTGCAGGCCTCAGGCAGAACGAGAGGAATAGGGGTGACCAGCGTATA
GCCCCATGTTCTCCCTTTGCCCAGGGGACAGGGCCTGGGCCTGCCCTGGGAAGAGCGCCC
AGGTGTCGCTTCCCAGCCCGACCAAGACCCACTGACGGGTGATGGCCGAGAGGGAGGAAG
ACGAGGAGGAAGCCTGGCTGCAGCTCCGGCCGGTGGAGCCCTTGCCCTCCCAGTGCTGCG
GCAGTGGCTGCTCGCCCTGTGTGTTCGACCTCTACCAGCGGGACCTGGCAAGGTGGGAGG
CAGCCCGAGCCAGCAAGGACAGGAGCCTGCTGAGAGGGAGCACGTCCCAGAGCTGCCCCT
CCGAGCTGAACCCGGAGACCTTCATGGCCTTTCGCATCAGTGCCATGGACAGGCTCTCTA
AGGACACCTACCTAGTCCGGTTCGCGCTACCTGGAAACAGCCAGCTTGGCTTGCGACCTG
GCCAGCACCTCATCCTACGAGGGACAGTAGATGACTTAGAAATTCAGAGAGCCTATACAC
CCATCAGCCCTGCCAACACAGAAGGATACTTTGAAGTTTTAATCAAGTGCTACCAGACTG
GGCTGATGTCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACCCTGCCCGCTTCGCCGCGGGCGGGGGGGGAACCTGCATGATCCTCACCTGAGGGGAA
TCGCTGGAGGCACCCAGCCCCGGACGAGGTCACCGGTTGGAATTGCTGTGACCTGCCTGC
CCGCCTCCCGCGCCAGGCAGCAGATCCCAGGGTGGGTTCACTCCATCCCCAGGGCTCGCA
CTGAGCTTGGTGCCTGCAGGCCTCAGGCAGAACGAGAGGAATAGGGGTGACCAGCGTATA
GCCCCATGTTCTCCCTTTGCCCAGGGGACAGGGCCTGGGCCTGCCCTGGGAAGAGCGCCC
AGGTGTCGCTTCCCAGCCCGACCAAGACCCACTGACGGGTGATGGCCGAGAGGGAGGAAG
ACGAGGAGGAAGCCTGGCTGCAGCTCCGGCCGGTGGAGCCCTTGCCCTCCCAGTGCTGCG
GCAGTGGCTGCTCGCCCTGTGTGTTCGACCTCTACCAGCGGGACCTGGCAAGGTGGGAGG
CAGCCCGAGCCAGCAAGGACAGGAGCCTGCTGAGAGGGAGCACGTCCCAGAGCTGCCCCT
CCGAGCTGAACCCGGAGACCTTCATGGCCTTTCGCATCAGTGCCATGGACAGGCTCTCTA
AGGACACCTACCTAGTCCGGTTCGCGCTACCTGGAAACAGCCAGCTTGGCTTGCGACCTG
GCCAGCACCTCATCCTACGAGGGACAGTAGATGACTTAGAAATTCAGAGAGCCTATACAC
CCATCAGCCCTGCCAACACAGAAGGATACTTTGAAGTTTTAATCAAGTGCTACCAGACTG
GGCTGATGTCCC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q6IPT4_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q6IPT4_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               258-678, gnl|bosTau2|chr26 (12156105-12155696)
               

               
               258-678, gnl|Hg17|chr1 (54373407-54368446)
               

               
               258-678, gnl|Mm7|chr4 (106445026-106447453)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               258-678, gnl|bosTau2|chr26 (12156105-12155696)
               

               
               258-678, gnl|Hg17|chr1 (54373407-54368446)
               

               
               258-678, gnl|Mm7|chr4 (106445026-106447453)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               mas (0.210305)
               

               
               nje (0.16592)
               

               
               cly (0.120642)
               

               
               pgl (0.118483)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)
               

               
               nje (0.16592)
               

               
               cly (0.120642)
               

               
               pgl (0.118483)

	258-678, gnl\|bosTau2\|chr26 (12156105-12155696)
	258-678, gnl\|Hg17\|chr1 (54373407-54368446)
	258-678, gnl\|Mm7\|chr4 (106445026-106447453)