Non-Coding RNA Search

Ss1.1-Pig2-123I04.5

Sequence:


               
               AACACGGGGACCATGGCTCTAGCACGTCAGCTTCGGCTGTTATCGCTCGTGACTCGGTTG
CATCTGGCGCCTCGACGGGATCTAACGGTCCGCGGTCCCGACGAGCCCCTGCCAGTGGTG
CGCATTCCGCGGGCTCTACAACGGCGTCAGGAACAGCGGCAGAGGGGGCAGCAGGGCCCC
CCGCGGCCGGTCTTGGTGAGACCTGGCCAGCTGCTGATCTCGGCGCGGCGGCCGGAGTTG
AACCAGCCCGCGCGTCTCACGCTGGGCCGTTGGGAGCCCGCACCACTCGCTTCACGTGGC
TGGAAGAATCGGCGCGCCCGCCAGGACCACTTCTCAATCGAGCGCAAGCAACAGGAGGCC
CCAGCGTTGCGGAACCTCTCGTCCAAGGACAGCTTTGCCGATCTGGGTCTGGAGCCCCGC
GTGCTGAGCGCACTGCAAGAGGCTGCTCCCGAAGTCGTTCGGCCCACAACCGTTCAGTCA
AGTACCATTCCCCCTCTACTTGGTGGCCGCCACATCCTCTGCGCTGCGGAGACCGGCAGT
GGCAAGACTCTTGGCTACATGCTACCTCTGCTTCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACACGGGGACCATGGCTCTAGCACGTCAGCTTCGGCTGTTATCGCTCGTGACTCGGTTG
CATCTGGCGCCTCGACGGGATCTAACGGTCCGCGGTCCCGACGAGCCCCTGCCAGTGGTG
CGCATTCCGCGGGCTCTACAACGGCGTCAGGAACAGCGGCAGAGGGGGCAGCAGGGCCCC
CCGCGGCCGGTCTTGGTGAGACCTGGCCAGCTGCTGATCTCGGCGCGGCGGCCGGAGTTG
AACCAGCCCGCGCGTCTCACGCTGGGCCGTTGGGAGCCCGCACCACTCGCTTCACGTGGC
TGGAAGAATCGGCGCGCCCGCCAGGACCACTTCTCAATCGAGCGCAAGCAACAGGAGGCC
CCAGCGTTGCGGAACCTCTCGTCCAAGGACAGCTTTGCCGATCTGGGTCTGGAGCCCCGC
GTGCTGAGCGCACTGCAAGAGGCTGCTCCCGAAGTCGTTCGGCCCACAACCGTTCAGTCA
AGTACCATTCCCCCTCTACTTGGTGGCCGCCACATCCTCTGCGCTGCGGAGACCGGCAGT
GGCAAGACTCTTGGCTACATGCTACCTCTGCTTCAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55644079|ref|XP_511048.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55644079|ref|XP_511048.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-575, gnl|bosTau2|chr18 (14877940-14878512)
               

               
               3-575, gnl|Hg17|chr16 (66614616-66614044)
               

               
               3-575, gnl|Mm7|chr8 (104610289-104609717)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-575, gnl|bosTau2|chr18 (14877940-14878512)
               

               
               3-575, gnl|Hg17|chr16 (66614616-66614044)
               

               
               3-575, gnl|Mm7|chr8 (104610289-104609717)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nep (0.183925)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)

	3-575, gnl\|bosTau2\|chr18 (14877940-14878512)
	3-575, gnl\|Hg17\|chr16 (66614616-66614044)
	3-575, gnl\|Mm7\|chr8 (104610289-104609717)