Non-Coding RNA Search

Ss1.1-Pig2-126A02.5

Sequence:


               
               GCACGAGTGAAAGAGCAATAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAGTGCTGTGT
TCTCCTGAAGGACAGGGTTGCATTGTTTGACATCAGTCCCTAAAGAGGTTAGGAGTTGTC
CCCAAAACAAAGTTTAAAAACAGCAAAATAAAAAGCACTTTAAGATATAATCTTACTGAG
TTTGACTTCATAAAATCATCTTTTTAATGCTTGGAGACATATTGAATAAACTGTAGTCTT
AAATCCTGTGATCTGCAATCATTTGCTTTTGTTGAAAACATAATTACTGAAACCCTTGGT
ATTGGTTGTGTATGAAGTTACATATTTGAGTCGAGAGATACTGCTTTGTGAGTTTCCACA
TATTTTAATTCGGAGAAGGAATGTGTGACTTTGTTTCTCCTCAACAGGACTAATTCACCC
TAAAAAGATAGGGACAAGATTTATTTTCCCAGAAATAACTAGCAAGCAACTGAACAACCA
TCCCTTCCGACGTGTTTCCCAAGTTCAGCGCCGTTCACTCATTTCAGCGTAGGTACCAGC
TCCCCCTTCCTCAGGAGGGAAGGGAACATCCCAGCACATTTGGTATATTTTGTACATTTT
GGGGTTTGAGTCCCTGCACACGTTTTCTGCCCTGTTTGCCTTCAGTTGTGTCCTCTGCCC
TGTTCTGTGCTCACCGTGTGCAGAACTAGGAAGCCCCCATCTCGATCTGCAGTCCACTGG
AAGCGCAGTGGACACGTGACAGGACAGACAGCTGTTCCAGCTGCGCACTGCAAACCCTGT
CATCTCACTGTTAAAGCTTGCAGTTGCCACGAAGCTGGGCTGCAGGGTGTAATTGCTCGA
CTTACGCAGGCTGGTGGCGGCTTTCGTCAAAGACACCTAGTGGGTGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCACGAGTGAAAGAGCAATAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAGTGCTGTGT
TCTCCTGAAGGACAGGGTTGCATTGTTTGACATCAGTCCCTAAAGAGGTTAGGAGTTGTC
CCCAAAACAAAGTTTAAAAACAGCAAAATAAAAAGCACTTTAAGATATAATCTTACTGAG
TTTGACTTCATAAAATCATCTTTTTAATGCTTGGAGACATATTGAATAAACTGTAGTCTT
AAATCCTGTGATCTGCAATCATTTGCTTTTGTTGAAAACATAATTACTGAAACCCTTGGT
ATTGGTTGTGTATGAAGTTACATATTTGAGTCGAGAGATACTGCTTTGTGAGTTTCCACA
TATTTTAATTCGGAGAAGGAATGTGTGACTTTGTTTCTCCTCAACAGGACTAATTCACCC
TAAAAAGATAGGGACAAGATTTATTTTCCCAGAAATAACTAGCAAGCAACTGAACAACCA
TCCCTTCCGACGTGTTTCCCAAGTTCAGCGCCGTTCACTCATTTCAGCGTAGGTACCAGC
TCCCCCTTCCTCAGGAGGGAAGGGAACATCCCAGCACATTTGGTATATTTTGTACATTTT
GGGGTTTGAGTCCCTGCACACGTTTTCTGCCCTGTTTGCCTTCAGTTGTGTCCTCTGCCC
TGTTCTGTGCTCACCGTGTGCAGAACTAGGAAGCCCCCATCTCGATCTGCAGTCCACTGG
AAGCGCAGTGGACACGTGACAGGACAGACAGCTGTTCCAGCTGCGCACTGCAAACCCTGT
CATCTCACTGTTAAAGCTTGCAGTTGCCACGAAGCTGGGCTGCAGGGTGTAATTGCTCGA
CTTACGCAGGCTGGTGGCGGCTTTCGTCAAAGACACCTAGTGGGTGGA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               36-888, gnl|bosTau2|chr3 (58770205-58771044)
               

               
               36-888, gnl|Hg17|chr1 (55246047-55245134)
               

               
               36-888, gnl|Mm7|chr4 (105815864-105816724)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               36-888, gnl|bosTau2|chr3 (58770205-58771044)
               

               
               36-888, gnl|Hg17|chr1 (55246047-55245134)
               

               
               36-888, gnl|Mm7|chr4 (105815864-105816724)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	36-888, gnl\|bosTau2\|chr3 (58770205-58771044)
	36-888, gnl\|Hg17\|chr1 (55246047-55245134)
	36-888, gnl\|Mm7\|chr4 (105815864-105816724)