Ss1.1-Pig2-126J04.5
|
GGCGGCGGCTGCCGCGGACCTTTAGATGCTTTCCAGGAAGAGAGGGGACACCTTGCTGAT
GCCACCGTCCTCAAACCAGTCTTCTCCACCTGCCTGCTGTCTGCCCGGGATTCCTGGAAA
CTTCTGGTTGGAGGAGATCTGTCCACGCTCACACTGGGCAAGAGGAAGCCAAGACCACAG
CCATGAGCGAGTCACATGTGCAGAGGCTGTCCACCATCCTGCTGGATGCCATCACCGACA
AAGACCCTCTGGTGCAGGAGCAGGTGTGTGGGGCCCTGTGCGCCCTGGGAGAGTCACGGC
CTGAAGAGGTGCTCCTCGCCTGTGCGGAGCACCTGCGCCAGCATGAGAAGCTGGCGCACC
CCTACCGGACCATGATCCTGAGGGCGGTGGAGACGGTCGTGAGCAGCCGCATCGGCGAGC
TGGACAAGGACGTGGCCAGGACCAGGCCGTGAGCGGAAGCCGCAGAACCTCCGTGCCAGG
ACTCCATCTCTCCCTTTTGGTTTTCTGGAGGAAAGAAAGCAAAGGTCCTCTCCCGGCGTC
TTCATACGAGGAAGGAACGCGGAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GGCGGCGGCTGCCGCGGACCTTTAGATGCTTTCCAGGAAGAGAGGGGACACCTTGCTGAT
GCCACCGTCCTCAAACCAGTCTTCTCCACCTGCCTGCTGTCTGCCCGGGATTCCTGGAAA
CTTCTGGTTGGAGGAGATCTGTCCACGCTCACACTGGGCAAGAGGAAGCCAAGACCACAG
CCATGAGCGAGTCACATGTGCAGAGGCTGTCCACCATCCTGCTGGATGCCATCACCGACA
AAGACCCTCTGGTGCAGGAGCAGGTGTGTGGGGCCCTGTGCGCCCTGGGAGAGTCACGGC
CTGAAGAGGTGCTCCTCGCCTGTGCGGAGCACCTGCGCCAGCATGAGAAGCTGGCGCACC
CCTACCGGACCATGATCCTGAGGGCGGTGGAGACGGTCGTGAGCAGCCGCATCGGCGAGC
TGGACAAGGACGTGGCCAGGACCAGGCCGTGAGCGGAAGCCGCAGAACCTCCGTGCCAGG
ACTCCATCTCTCCCTTTTGGTTTTCTGGAGGAAAGAAAGCAAAGGTCCTCTCCCGGCGTC
TTCATACGAGGAAGGAACGCGGAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
21-128, gnl|bosTau2|chr14 (91731-91622) |
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21-128, gnl|Mm7|chr15 (76472579-76472682) |
| |
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205-350, gnl|bosTau2|chr14 (89851-89706) |
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205-350, gnl|canFam2|chr13 (40677481-40677653) |
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205-350, gnl|echTel1|scaffold_289132 (240-66) |
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205-350, gnl|fr1|chrUn (119782954-119782794) |
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205-350, gnl|hg17|chr8 (145295163-145295335) |
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205-350, gnl|Hg17|chr8 (145295186-145295331) |
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205-350, gnl|loxAfr1|scaffold_28588 (13991-13819) |
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205-350, gnl|mm7|chr15 (76476336-76476505) |
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205-350, gnl|Mm7|chr15 (76476356-76476501) |
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205-350, gnl|oryCun1|scaffold_87114 (306-470) |
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205-350, gnl|panTro1|chr7_random (13651184-13651356) |
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205-350, gnl|rheMac2|chr8 (146784727-146784899) |
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205-350, gnl|rn3|chr7 (114476435-114476603) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
21-128, gnl|bosTau2|chr14 (91731-91622) |
|
21-128, gnl|Mm7|chr15 (76472579-76472682) |
| |
|
205-350, gnl|bosTau2|chr14 (89851-89706) |
|
205-350, gnl|canFam2|chr13 (40677481-40677653) |
|
205-350, gnl|echTel1|scaffold_289132 (240-66) |
|
205-350, gnl|fr1|chrUn (119782954-119782794) |
|
205-350, gnl|hg17|chr8 (145295163-145295335) |
|
205-350, gnl|Hg17|chr8 (145295186-145295331) |
|
205-350, gnl|loxAfr1|scaffold_28588 (13991-13819) |
|
205-350, gnl|mm7|chr15 (76476336-76476505) |
|
205-350, gnl|Mm7|chr15 (76476356-76476501) |
|
205-350, gnl|oryCun1|scaffold_87114 (306-470) |
|
205-350, gnl|panTro1|chr7_random (13651184-13651356) |
|
205-350, gnl|rheMac2|chr8 (146784727-146784899) |
|
205-350, gnl|rn3|chr7 (114476435-114476603) |
|
cje (0.165235) |
|
pla (0.133672) |
|
cje (0.165235) |
|
pla (0.133672) |
