Non-Coding RNA Search

Ss1.1-Pig2-126P11.5

Sequence:


               
               TGCGCGCCTCTTCGGCAAAACTGTAAGAGAGAAGGAGTCTGGCTCCATGACCAGCAATAT
GGAAGGCTGTTCACTGAACAGCACCTACAGTATTCCAGGCTCTGAAATACATTGATCAAG
GAGAGACAATGGTAAAAAATGACATGTTTTAGTTGCTTCTAGTTGCTGAAGTAAAGGAAC
CCTGCAACCTCCCCATGCTATCTGTTGACATGGAAAACAAGGAAAATGGCTCTGTCGGTG
TAAAAAATTCCGTGGAGAATGGGAGGCCACCTGATCCTGCTGACTGGGCCGTGATGGATG
TCGTCAATTATTTCCGAACAGCAGGATTTGAGGAGCAAGCCAATGCATTTCAGGAACAGG
AAATTGATGGAAAATCCCTGCTATTGATGACAAGAAATGATGTGCTGACAGGACTTCAGT
TAAAATTGGGGCCTGCTCTGAAAATCTACGAGTATCACGTAAAACCTCTGCAGACAAAGC
ATTTAAAGAACAACTCTTCATAGTACAGTCCAGTTGAGGTCTTGAACCTCAAAAAATACA
TAATAACATAATTTAGTTTCATGTGATGAAACTTTGTAAACAGAATACCATACATGTGTA
TATGTAAAGAATTTCAATCAAATGAAACGTTATCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCGCGCCTCTTCGGCAAAACTGTAAGAGAGAAGGAGTCTGGCTCCATGACCAGCAATAT
GGAAGGCTGTTCACTGAACAGCACCTACAGTATTCCAGGCTCTGAAATACATTGATCAAG
GAGAGACAATGGTAAAAAATGACATGTTTTAGTTGCTTCTAGTTGCTGAAGTAAAGGAAC
CCTGCAACCTCCCCATGCTATCTGTTGACATGGAAAACAAGGAAAATGGCTCTGTCGGTG
TAAAAAATTCCGTGGAGAATGGGAGGCCACCTGATCCTGCTGACTGGGCCGTGATGGATG
TCGTCAATTATTTCCGAACAGCAGGATTTGAGGAGCAAGCCAATGCATTTCAGGAACAGG
AAATTGATGGAAAATCCCTGCTATTGATGACAAGAAATGATGTGCTGACAGGACTTCAGT
TAAAATTGGGGCCTGCTCTGAAAATCTACGAGTATCACGTAAAACCTCTGCAGACAAAGC
ATTTAAAGAACAACTCTTCATAGTACAGTCCAGTTGAGGTCTTGAACCTCAAAAAATACA
TAATAACATAATTTAGTTTCATGTGATGAAACTTTGTAAACAGAATACCATACATGTGTA
TATGTAAAGAATTTCAATCAAATGAAACGTTATCCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5VXD4_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5VXD4_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               358-636, gnl|bosTau2|chr3 (46169836-46170111)
               

               
               358-636, gnl|Hg17|chr1 (84527333-84527610)
               

               
               358-636, gnl|Mm7|chr3 (146544990-146544718)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               358-636, gnl|bosTau2|chr3 (46169836-46170111)
               

               
               358-636, gnl|Hg17|chr1 (84527333-84527610)
               

               
               358-636, gnl|Mm7|chr3 (146544990-146544718)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cte (0.29274)
               

               
               tra (0.123092)
               

               
               ebs (0.118301)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)
               

               
               tra (0.123092)
               

               
               ebs (0.118301)

	358-636, gnl\|bosTau2\|chr3 (46169836-46170111)
	358-636, gnl\|Hg17\|chr1 (84527333-84527610)
	358-636, gnl\|Mm7\|chr3 (146544990-146544718)