Non-Coding RNA Search

Ss1.1-Pig2-128E10.5

Sequence:


               
               ATAAACTTGGAATTCTATTTTAATTATGTCGTTCTGGCTGCTTGCAGTATCAGTTTGCCC
CTCTTGTTAGGAAGCTATGTAACAATCTGTCGTCTACTTGTGCAGTCTTTTTCACACAAC
AGTAATAGCAGAAGTCCAACCTACTCAGAATCATTTTCTTGGGTTGTCTCTTATATCTGA
ACAATACAAACTTGTTTTATAAAATTATATTTTGTCTCTGGAGAATTAAGTCAATTAGAA
CTCTTTCGTGAACAGTAAGTGATAGAAGAAAATAGATGTCTTATATTACTCATATATGTA
GTTTTCTGTTTATATAACTTTTCATGGTGTTTTACATTTGTTGGAGTATAAAGAACAATG
TAGTCAATATTTTCTACCAGTAATGGAATTTTTAAATATTTTTACAATGCATGAATACAT
AAGCTTAGAAAATGGAAAAATATGTGTCCACAGCAGGGTTGACAGTTACTATCTTATTTA
AATCTGTACAGAAAATGAATATTTTGAAACGTGCATATAGTGTTTTATGGTTAATACATT
ATAATTACAAATAGTAAATAAAATGTTAAGATTGTTTCCATACTCACCAACAGAAGAAAG
TTTTGATAAGTACTTTTGCAAATAATTGAATGTGGCTGTGTAGCTCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAAACTTGGAATTCTATTTTAATTATGTCGTTCTGGCTGCTTGCAGTATCAGTTTGCCC
CTCTTGTTAGGAAGCTATGTAACAATCTGTCGTCTACTTGTGCAGTCTTTTTCACACAAC
AGTAATAGCAGAAGTCCAACCTACTCAGAATCATTTTCTTGGGTTGTCTCTTATATCTGA
ACAATACAAACTTGTTTTATAAAATTATATTTTGTCTCTGGAGAATTAAGTCAATTAGAA
CTCTTTCGTGAACAGTAAGTGATAGAAGAAAATAGATGTCTTATATTACTCATATATGTA
GTTTTCTGTTTATATAACTTTTCATGGTGTTTTACATTTGTTGGAGTATAAAGAACAATG
TAGTCAATATTTTCTACCAGTAATGGAATTTTTAAATATTTTTACAATGCATGAATACAT
AAGCTTAGAAAATGGAAAAATATGTGTCCACAGCAGGGTTGACAGTTACTATCTTATTTA
AATCTGTACAGAAAATGAATATTTTGAAACGTGCATATAGTGTTTTATGGTTAATACATT
ATAATTACAAATAGTAAATAAAATGTTAAGATTGTTTCCATACTCACCAACAGAAGAAAG
TTTTGATAAGTACTTTTGCAAATAATTGAATGTGGCTGTGTAGCTCTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-612, gnl|bosTau2|chr14 (44501157-44500561)
               

               
               1-612, gnl|Hg17|chr8 (93967322-93966711)
               

               
               1-612, gnl|Mm7|chr4 (12908369-12908997)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-612, gnl|bosTau2|chr14 (44501157-44500561)
               

               
               1-612, gnl|Hg17|chr8 (93967322-93966711)
               

               
               1-612, gnl|Mm7|chr4 (12908369-12908997)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ski (0.146735)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ski (0.146735)

	1-612, gnl\|bosTau2\|chr14 (44501157-44500561)
	1-612, gnl\|Hg17\|chr8 (93967322-93966711)
	1-612, gnl\|Mm7\|chr4 (12908369-12908997)