Non-Coding RNA Search

Ss1.1-Pig2-129F06.5

Sequence:


               
               GGCGTCGTAATCTACGCCCCCGCGCTCATCCTGAACCAAGTGACGGGGCTGGATATCTGG
GCTTCACTCCTATCCACTGGAATCATCTGCACCTTCTACACTACTGTGGGTGGCATGAAG
GCTGTGATCTGGACTGACGTGTTTCAGGTCTTAGTGATGCTGACTGGTTTCTGGGTTGTC
CTGGCTCGCGGAACTGTGCTCGTGGGTGGGCCTGGACGTGTGCTTGAGCTTGCCAAGAAC
CACTCCCGGATCAACCTGATGGACTTTGATCTGGACCCGAGGCGCCGCTACACCTTCTGG
ACTTTTGTCGTGGGTGGCACCTTGGTATGGCTCTCAATGTATGGAGTGAACCAAGCACAG
GTGCAGCGCTACGTGGCCTGTCGCACAGAGAAGCAAGCTAAGTTGGCCCTGCTCATCAAC
CAGGTGGGCCTGTTCCTAATCGTGTCCAGCGCTGCTGCCTGTGGTATTGTCATGTTCGCG
CTCTACGTTGACTGTGACCCTCTCCTGGCAGGGCATATCTCTGCCCCAGACCAGTACATG
CCCCTGCTGGTGCTGGACATCTTTGAAGACCTGCCTGGAGTCCCTGGGCTCTTTCTGGCC
TGTGCCTACAGCGGCACCCTCAGCACTGCATCCACCAGCATCAATGCCATGGCTGCTGTC
ACTGTGGAGGACCTCATCAAACCTCGGCTGCCAAACCTGGCTCCACGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGTCGTAATCTACGCCCCCGCGCTCATCCTGAACCAAGTGACGGGGCTGGATATCTGG
GCTTCACTCCTATCCACTGGAATCATCTGCACCTTCTACACTACTGTGGGTGGCATGAAG
GCTGTGATCTGGACTGACGTGTTTCAGGTCTTAGTGATGCTGACTGGTTTCTGGGTTGTC
CTGGCTCGCGGAACTGTGCTCGTGGGTGGGCCTGGACGTGTGCTTGAGCTTGCCAAGAAC
CACTCCCGGATCAACCTGATGGACTTTGATCTGGACCCGAGGCGCCGCTACACCTTCTGG
ACTTTTGTCGTGGGTGGCACCTTGGTATGGCTCTCAATGTATGGAGTGAACCAAGCACAG
GTGCAGCGCTACGTGGCCTGTCGCACAGAGAAGCAAGCTAAGTTGGCCCTGCTCATCAAC
CAGGTGGGCCTGTTCCTAATCGTGTCCAGCGCTGCTGCCTGTGGTATTGTCATGTTCGCG
CTCTACGTTGACTGTGACCCTCTCCTGGCAGGGCATATCTCTGCCCCAGACCAGTACATG
CCCCTGCTGGTGCTGGACATCTTTGAAGACCTGCCTGGAGTCCCTGGGCTCTTTCTGGCC
TGTGCCTACAGCGGCACCCTCAGCACTGCATCCACCAGCATCAATGCCATGGCTGCTGTC
ACTGTGGAGGACCTCATCAAACCTCGGCTGCCAAACCTGGCTCCACGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               108-263, gnl|bosTau2|chr7 (4524695-4524540)
               

               
               108-263, gnl|Hg17|chr19 (17847760-17847915)
               

               
               108-263, gnl|Mm7|chr8 (69344877-69344722)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               108-263, gnl|bosTau2|chr7 (4524695-4524540)
               

               
               108-263, gnl|Hg17|chr19 (17847760-17847915)
               

               
               108-263, gnl|Mm7|chr8 (69344877-69344722)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	108-263, gnl\|bosTau2\|chr7 (4524695-4524540)
	108-263, gnl\|Hg17\|chr19 (17847760-17847915)
	108-263, gnl\|Mm7\|chr8 (69344877-69344722)