Ss1.1-Pig2-129K17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCCGTCTTCTGCGGACACCTGGGCAAGGTGGAGCTGGCAGCAGTGACCCTCTCGGTGGCC TTTGTCAATGTCTGTGGTGTGTCCATTGGATTCGGCCTGTCCTCGGCCTGTGACACCTTG ATGTCCCAGAGCTTCGGCAGCCCCAACAAGAAGCACGTGGGGGTCATCCTGCAGCGGGGC GCCCTGGTCCTGCTGCTCTGCTGCCTCCCCTGCTGGGCGCTCTTCCTCAACACCGAGCAC ATCCTGCTGCTCTTCAGGCAGGACCCGGCCGTGTCCAGGCTGGCCCAGGACTACGTGCAG ATTTTCATCCCTGCACTCCCGGCGAATTTTCTTTACTGCCTGCTGGCAAAATACTTACAA AACCAGGGTGTCGTCTGGCCCCAAGTTCTCAGTGGCATCGTGGGCAACTGCGTGAACGGC CTGGCCAACTACATCCTGGTGTCCACGCTGGGCCAGGGGGTCAGGGGCTCGGCCTACGCC AACACCATCTCCCAGTTGATGCAGACACTTTTCCTCCTGCTCTACATTGTGCTGAGGAAG CTGCACGTGGACACGTGGGGAGGCTGGTCCTGCCAGTGCCTGCAGGACTGGGGCCCCTTC TTCTCGCTGGCCGTCCCCAGCATGCTCATGACCTGCATCGAGTGGTGGGCCTACGAGATC GGGAGCTTCCTCATGGGGCTGCTCAGCGTGCTGGACCTCTCTGCCCAGGCCGTCATCTAC GAGGTGGCCACTGTCACCTACATGATTCCCATGGGACTCAGCATCGCGGTCTGTGTCCGC GTGGGGACGGCTCTGGGAGCTGCAGACACGGTGCAGGCCAAGCGATCCGCCGTCTCAGGC ATGCTCTGCACGGTTGGTGCTGCGATGGTCGTGGGCGCCCTGCTGAGCATCCTGAGGAAT AAACTGGGCCACATCTTCACCCATGACGAGGAAGTGGTCGCCCTGGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCCGTCTTCTGCGGACACCTGGGCAAGGTGGAGCTGGCAGCAGTGACCCTCTCGGTGGCC TTTGTCAATGTCTGTGGTGTGTCCATTGGATTCGGCCTGTCCTCGGCCTGTGACACCTTG ATGTCCCAGAGCTTCGGCAGCCCCAACAAGAAGCACGTGGGGGTCATCCTGCAGCGGGGC GCCCTGGTCCTGCTGCTCTGCTGCCTCCCCTGCTGGGCGCTCTTCCTCAACACCGAGCAC ATCCTGCTGCTCTTCAGGCAGGACCCGGCCGTGTCCAGGCTGGCCCAGGACTACGTGCAG ATTTTCATCCCTGCACTCCCGGCGAATTTTCTTTACTGCCTGCTGGCAAAATACTTACAA AACCAGGGTGTCGTCTGGCCCCAAGTTCTCAGTGGCATCGTGGGCAACTGCGTGAACGGC CTGGCCAACTACATCCTGGTGTCCACGCTGGGCCAGGGGGTCAGGGGCTCGGCCTACGCC AACACCATCTCCCAGTTGATGCAGACACTTTTCCTCCTGCTCTACATTGTGCTGAGGAAG CTGCACGTGGACACGTGGGGAGGCTGGTCCTGCCAGTGCCTGCAGGACTGGGGCCCCTTC TTCTCGCTGGCCGTCCCCAGCATGCTCATGACCTGCATCGAGTGGTGGGCCTACGAGATC GGGAGCTTCCTCATGGGGCTGCTCAGCGTGCTGGACCTCTCTGCCCAGGCCGTCATCTAC GAGGTGGCCACTGTCACCTACATGATTCCCATGGGACTCAGCATCGCGGTCTGTGTCCGC GTGGGGACGGCTCTGGGAGCTGCAGACACGGTGCAGGCCAAGCGATCCGCCGTCTCAGGC ATGCTCTGCACGGTTGGTGCTGCGATGGTCGTGGGCGCCCTGCTGAGCATCCTGAGGAAT AAACTGGGCCACATCTTCACCCATGACGAGGAAGTGGTCGCCCTGGTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 122-279, gnl|bosTau2|chr19 (24625823-24625980) | |
| 122-279, gnl|Hg17|chr17 (19557886-19557729) | |
| 122-279, gnl|Mm7|chr11 (61451832-61451675) | |
| 364-465, gnl|bosTau2|chr19 (24629925-24630026) | |
| 364-465, gnl|Hg17|chr17 (19552307-19552206) | |
| 364-465, gnl|Mm7|chr11 (61445052-61444951) | |
| 561-682, gnl|bosTau2|chr19 (24720384-24720263) | |
| 561-682, gnl|canFam2|chr5 (43664496-43664358) | |
| 561-682, gnl|danRer3|chrUn (13143943-13144073) | |
| 561-682, gnl|dasNov1|scaffold_95040 (7729-7591) | |
| 561-682, gnl|echTel1|scaffold_223442 (4427-4305) | |
| 561-682, gnl|fr1|chrUn (220217670-220217788) | |
| 561-682, gnl|galGal2|chr19 (6425567-6425429) | |
| 561-682, gnl|hg17|chr17 (19399684-19399822) | |
| 561-682, gnl|Hg17|chr17 (19399699-19399820) | |
| 561-682, gnl|loxAfr1|scaffold_4756 (78052-77914) | |
| 561-682, gnl|mm7|chr11 (61444517-61444379) | |
| 561-682, gnl|Mm7|chr11 (61444500-61444379) | |
| 561-682, gnl|monDom2|scaffold_86 (4903524-4903386) | |
| 561-682, gnl|oryCun1|scaffold_159561 (14893-15029) | |
| 561-682, gnl|panTro1|chr19 (19727833-19727971) | |
| 561-682, gnl|rheMac2|chr16 (19107220-19107359) | |
| 561-682, gnl|rn3|chr10 (47546529-47546391) | |
| 561-682, gnl|tetNig1|chrUn_random (118943310-118943192) | |
| 561-682, gnl|xenTro1|scaffold_375 (1034485-1034620) | |
| 744-859, gnl|bosTau2|chr19 (24633243-24633359) | |
| 744-859, gnl|Hg17|chr17 (19548084-19547968) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 122-279, gnl|bosTau2|chr19 (24625823-24625980) | |
| 122-279, gnl|Hg17|chr17 (19557886-19557729) | |
| 122-279, gnl|Mm7|chr11 (61451832-61451675) | |
| 364-465, gnl|bosTau2|chr19 (24629925-24630026) | |
| 364-465, gnl|Hg17|chr17 (19552307-19552206) | |
| 364-465, gnl|Mm7|chr11 (61445052-61444951) | |
| 561-682, gnl|bosTau2|chr19 (24720384-24720263) | |
| 561-682, gnl|canFam2|chr5 (43664496-43664358) | |
| 561-682, gnl|danRer3|chrUn (13143943-13144073) | |
| 561-682, gnl|dasNov1|scaffold_95040 (7729-7591) | |
| 561-682, gnl|echTel1|scaffold_223442 (4427-4305) | |
| 561-682, gnl|fr1|chrUn (220217670-220217788) | |
| 561-682, gnl|galGal2|chr19 (6425567-6425429) | |
| 561-682, gnl|hg17|chr17 (19399684-19399822) | |
| 561-682, gnl|Hg17|chr17 (19399699-19399820) | |
| 561-682, gnl|loxAfr1|scaffold_4756 (78052-77914) | |
| 561-682, gnl|mm7|chr11 (61444517-61444379) | |
| 561-682, gnl|Mm7|chr11 (61444500-61444379) | |
| 561-682, gnl|monDom2|scaffold_86 (4903524-4903386) | |
| 561-682, gnl|oryCun1|scaffold_159561 (14893-15029) | |
| 561-682, gnl|panTro1|chr19 (19727833-19727971) | |
| 561-682, gnl|rheMac2|chr16 (19107220-19107359) | |
| 561-682, gnl|rn3|chr10 (47546529-47546391) | |
| 561-682, gnl|tetNig1|chrUn_random (118943310-118943192) | |
| 561-682, gnl|xenTro1|scaffold_375 (1034485-1034620) | |
| 744-859, gnl|bosTau2|chr19 (24633243-24633359) | |
| 744-859, gnl|Hg17|chr17 (19548084-19547968) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ute (0.132784) |