Ss1.1-Pig2-130L03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACGGTTCCTAGTCAGATTTGTTAACTACTACGCCACAAAGGGAACTCCAAACAAAACCA CCTTTTATGCCAGTTTCTAGAAACAAAAAGATAAATGCTCCAGGGTCTAGTATTAAAACA TAGTGCTTAACCTCTACCGTGCTATCCCTGCTTGTTCACTCAGGTAAGTCAGGTTCATAG AGAAAGTAACTGCTGAGGATCTCAAGCGCAACTATGTCTGTCATGCCAGAAATGCCAAAG GGGAGGTTGACAGACCGGCCAAGGTGAAACAGAAAGCTCCCAGATACACAGTGGAACTGG CATGTGGTTTTGGAGCCACAGTCCTGCTGGTGGTGATTCTCATTGTTGTTTACCATGTTT ACTGGCTGGAGATGGTCCTCTTTTATCGGGCTCATTTTGGAACAGATGAAACCATTTTAG ATGGGAAGGAATATGATATTTATGTATCCTATGCAAGGAATGCTGAAGAAGAAGAATTTG TATTACTCACCCTCCGTGGAGTCTTGGAGAATGAATTCGGATACAAGCTGTGCATCTTTG ACCGAGACAGTCTGCCTGGGGGAAATACGGTGGAAGCAGTTTTTGACTTCATTCAAAGGA GCCGGAGGATGATTGTTGTCCTGAGCCCAGACTATGTGACAGAAAAGAGCATCAGCATGC TGGAGTTCAAGCTGGGTGTCATGTGCCAAAACTCCATTGCCACCAAGCTCATTGTGGTTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACGGTTCCTAGTCAGATTTGTTAACTACTACGCCACAAAGGGAACTCCAAACAAAACCA CCTTTTATGCCAGTTTCTAGAAACAAAAAGATAAATGCTCCAGGGTCTAGTATTAAAACA TAGTGCTTAACCTCTACCGTGCTATCCCTGCTTGTTCACTCAGGTAAGTCAGGTTCATAG AGAAAGTAACTGCTGAGGATCTCAAGCGCAACTATGTCTGTCATGCCAGAAATGCCAAAG GGGAGGTTGACAGACCGGCCAAGGTGAAACAGAAAGCTCCCAGATACACAGTGGAACTGG CATGTGGTTTTGGAGCCACAGTCCTGCTGGTGGTGATTCTCATTGTTGTTTACCATGTTT ACTGGCTGGAGATGGTCCTCTTTTATCGGGCTCATTTTGGAACAGATGAAACCATTTTAG ATGGGAAGGAATATGATATTTATGTATCCTATGCAAGGAATGCTGAAGAAGAAGAATTTG TATTACTCACCCTCCGTGGAGTCTTGGAGAATGAATTCGGATACAAGCTGTGCATCTTTG ACCGAGACAGTCTGCCTGGGGGAAATACGGTGGAAGCAGTTTTTGACTTCATTCAAAGGA GCCGGAGGATGATTGTTGTCCTGAGCCCAGACTATGTGACAGAAAAGAGCATCAGCATGC TGGAGTTCAAGCTGGGTGTCATGTGCCAAAACTCCATTGCCACCAAGCTCATTGTGGTTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 54-178, gnl|bosTau2|chr1 (47688332-47688208) | |
| 54-178, gnl|Hg17|chr3 (191844522-191844641) | |
| 54-178, gnl|Mm7|chr16 (26371360-26371466) | |
| 272-449, gnl|bosTau2|chr1 (47688111-47687933) | |
| 272-449, gnl|canFam2|chr34 (25622304-25622469) | |
| 272-449, gnl|danRer3|chrUn (25325640-25325763) | |
| 272-449, gnl|dasNov1|scaffold_81 (204163-204328) | |
| 272-449, gnl|echTel1|scaffold_235993 (215-50) | |
| 272-449, gnl|fr1|chrUn (125797371-125797211) | |
| 272-449, gnl|galGal2|chr9 (13245809-13245640) | |
| 272-449, gnl|hg17|chr3 (191844731-191844896) | |
| 272-449, gnl|Hg17|chr3 (191844740-191844918) | |
| 272-449, gnl|loxAfr1|scaffold_4047 (79517-79682) | |
| 272-449, gnl|mm7|chr16 (26371562-26371727) | |
| 272-449, gnl|Mm7|chr16 (26371571-26371749) | |
| 272-449, gnl|monDom2|scaffold_92 (2119987-2120152) | |
| 272-449, gnl|oryCun1|scaffold_113447 (5192-5329) | |
| 272-449, gnl|panTro1|chr2 (195929223-195929388) | |
| 272-449, gnl|rheMac2|chr2 (182967933-182968098) | |
| 272-449, gnl|rn3|chr11 (76162605-76162440) | |
| 272-449, gnl|tetNig1|chr2 (8617732-8617858) | |
| 272-449, gnl|xenTro1|scaffold_148 (1008171-1008006) | |
| 565-720, gnl|bosTau2|chr1 (47676688-47676533) | |
| 565-720, gnl|Hg17|chr3 (191856380-191856535) | |
| 565-720, gnl|Mm7|chr16 (26383445-26383600) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 54-178, gnl|bosTau2|chr1 (47688332-47688208) | |
| 54-178, gnl|Hg17|chr3 (191844522-191844641) | |
| 54-178, gnl|Mm7|chr16 (26371360-26371466) | |
| 272-449, gnl|bosTau2|chr1 (47688111-47687933) | |
| 272-449, gnl|canFam2|chr34 (25622304-25622469) | |
| 272-449, gnl|danRer3|chrUn (25325640-25325763) | |
| 272-449, gnl|dasNov1|scaffold_81 (204163-204328) | |
| 272-449, gnl|echTel1|scaffold_235993 (215-50) | |
| 272-449, gnl|fr1|chrUn (125797371-125797211) | |
| 272-449, gnl|galGal2|chr9 (13245809-13245640) | |
| 272-449, gnl|hg17|chr3 (191844731-191844896) | |
| 272-449, gnl|Hg17|chr3 (191844740-191844918) | |
| 272-449, gnl|loxAfr1|scaffold_4047 (79517-79682) | |
| 272-449, gnl|mm7|chr16 (26371562-26371727) | |
| 272-449, gnl|Mm7|chr16 (26371571-26371749) | |
| 272-449, gnl|monDom2|scaffold_92 (2119987-2120152) | |
| 272-449, gnl|oryCun1|scaffold_113447 (5192-5329) | |
| 272-449, gnl|panTro1|chr2 (195929223-195929388) | |
| 272-449, gnl|rheMac2|chr2 (182967933-182968098) | |
| 272-449, gnl|rn3|chr11 (76162605-76162440) | |
| 272-449, gnl|tetNig1|chr2 (8617732-8617858) | |
| 272-449, gnl|xenTro1|scaffold_148 (1008171-1008006) | |
| 565-720, gnl|bosTau2|chr1 (47676688-47676533) | |
| 565-720, gnl|Hg17|chr3 (191856380-191856535) | |
| 565-720, gnl|Mm7|chr16 (26383445-26383600) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jca (0.11396) |