Non-Coding RNA Search

Ss1.1-Pig2-132G05.5

Sequence:


               
               CCATCCTTATTATATGGACCTGGAGCATGCTGCAGTTTCCCCTGGACCTGGCAGTGCAGC
ATGTCGTGTGTCCTTTGTCCATGACAACGAGGGGGTTCCCCAGACAGTTCTTTTGCCAGT
ACAGCGCTGACCTGTGGAACATCGGAATCAGCGTCTTCATACAAGACGGTCCCTTCCTGG
TTGTGCGCCTGCTACTGATGACCTACTTCAAAGTGGTCAACCAGATGCTGGTGTTCTTTG
CAGCCAAGAATTTCCTTGTGGTGGTGTTACAGCTCTACCGCCTGATGGTGTTGGCCCTGG
ATGTCCGTACTTCCTTGAGAAGTAAGCCAGCAGGCCCGAAAGGAGGGCACAGGTGCCCAG
GAGAACCAGCTGAGACTGGGGTCTCACCTGGAGACGGGAGAGGGGGTTCTAAGGAGGGCC
TGGCTATTCCTTTACAGGCCTCGTTGGTAACCTCTGAAGACTTCCCCCCAACATCATAGT
CAGTCACCGACAGCAGCATGCAGCTAGAAGTTTTGATGTACTGGTTCTTACACTCACAAC
CGTCCTCTCTCTCGCTTTCTTTTTAACCTCAGCATATAATAACTTTCAAAAGAACAACAT
ACAGAATGATCTTAAACCAAAGCTGAGGAATTTTTTTTTTTTTCTGACGGAATGAAAAGA
ACTTTGGTTAGTGGCTATCGTTCCCACTTCTGTGTGATGGTATCAGACATTACAGTTGTT
CCACGACTAAGTGATTTGTTTGTCTTGAACTGTTTGAAAAGCTATGGACAGGGTTACAGT
GACATGCCCTCAAGAGATTTAATGCAGACAAACTGTCGCGGCTGTTACCTGAAAATAGAG
AAGCTTTGAACTTCGGCTCTATTGTCAGACTATCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCATCCTTATTATATGGACCTGGAGCATGCTGCAGTTTCCCCTGGACCTGGCAGTGCAGC
ATGTCGTGTGTCCTTTGTCCATGACAACGAGGGGGTTCCCCAGACAGTTCTTTTGCCAGT
ACAGCGCTGACCTGTGGAACATCGGAATCAGCGTCTTCATACAAGACGGTCCCTTCCTGG
TTGTGCGCCTGCTACTGATGACCTACTTCAAAGTGGTCAACCAGATGCTGGTGTTCTTTG
CAGCCAAGAATTTCCTTGTGGTGGTGTTACAGCTCTACCGCCTGATGGTGTTGGCCCTGG
ATGTCCGTACTTCCTTGAGAAGTAAGCCAGCAGGCCCGAAAGGAGGGCACAGGTGCCCAG
GAGAACCAGCTGAGACTGGGGTCTCACCTGGAGACGGGAGAGGGGGTTCTAAGGAGGGCC
TGGCTATTCCTTTACAGGCCTCGTTGGTAACCTCTGAAGACTTCCCCCCAACATCATAGT
CAGTCACCGACAGCAGCATGCAGCTAGAAGTTTTGATGTACTGGTTCTTACACTCACAAC
CGTCCTCTCTCTCGCTTTCTTTTTAACCTCAGCATATAATAACTTTCAAAAGAACAACAT
ACAGAATGATCTTAAACCAAAGCTGAGGAATTTTTTTTTTTTTCTGACGGAATGAAAAGA
ACTTTGGTTAGTGGCTATCGTTCCCACTTCTGTGTGATGGTATCAGACATTACAGTTGTT
CCACGACTAAGTGATTTGTTTGTCTTGAACTGTTTGAAAAGCTATGGACAGGGTTACAGT
GACATGCCCTCAAGAGATTTAATGCAGACAAACTGTCGCGGCTGTTACCTGAAAATAGAG
AAGCTTTGAACTTCGGCTCTATTGTCAGACTATCTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|34530140|dbj|BAC85841.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|34530140|dbj|BAC85841.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               52-875, gnl|bosTau2|chr28 (12437830-12438640)
               

               
               52-875, gnl|Hg17|chr10 (62840513-62839701)
               

               
               52-875, gnl|Mm7|chr10 (68381802-68382609)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               52-875, gnl|bosTau2|chr28 (12437830-12438640)
               

               
               52-875, gnl|Hg17|chr10 (62840513-62839701)
               

               
               52-875, gnl|Mm7|chr10 (68381802-68382609)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	52-875, gnl\|bosTau2\|chr28 (12437830-12438640)
	52-875, gnl\|Hg17\|chr10 (62840513-62839701)
	52-875, gnl\|Mm7\|chr10 (68381802-68382609)