Ss1.1-Pig2-132L23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TATTTTCCTCCTAAGGCTATGCCTTTCTGCTGTTCCAGGAGGAGAGCTCAGTACAAGCTT TGATAGATGCCTGCCTGGAAGAAGACGGGAAACTGTACCTGTGCGTGTCGAGCCCCACCA TCAAGGATAAACCGGTGCAAATTCGACCATGGAACCTAAGTGACAGTGACTTTGTAATGG ATGGTTCTCAGCCTTTGGACCCCAGAAAAACTATCTTTGTTGGGGGAGTTCCACGACCCC TTCGAGCTGTTGAACTGGCAATGATCATGGACCGTTTGTATGGTGGTGTCTGCTATGCTG GCATTGATACGGATCCAGAGCTGAAGTACCCCAAAGGTGCTGGCCGCGTGGCGTTCTCCA ATCAGCAGAGTTACATTGCAGCCATCAGCGCTCGCTTTGTGCAGCTCCAACACAATGACA TTGACAAACGGGTGGAAGTGAAGCCATATGTGCTGGATGATCAGATGTGTGATGAGTGCC AGGGCACACGCTGTGGTGGGAAGTTTGCCCCGTTCTTCTGTGCCAACGTCACCTGTCTGC AGTATTACTGCGAATATTGCTGGGCGAGCATACATTCCCGCGCCGGGCGGGAGTTCCACA AACCGCTGGTGAAGGAGGGAGGCGACCGCCCTCGTCACGTCCCGTTCCGCTGGAGCTGAG CCCAGAGCAGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TATTTTCCTCCTAAGGCTATGCCTTTCTGCTGTTCCAGGAGGAGAGCTCAGTACAAGCTT TGATAGATGCCTGCCTGGAAGAAGACGGGAAACTGTACCTGTGCGTGTCGAGCCCCACCA TCAAGGATAAACCGGTGCAAATTCGACCATGGAACCTAAGTGACAGTGACTTTGTAATGG ATGGTTCTCAGCCTTTGGACCCCAGAAAAACTATCTTTGTTGGGGGAGTTCCACGACCCC TTCGAGCTGTTGAACTGGCAATGATCATGGACCGTTTGTATGGTGGTGTCTGCTATGCTG GCATTGATACGGATCCAGAGCTGAAGTACCCCAAAGGTGCTGGCCGCGTGGCGTTCTCCA ATCAGCAGAGTTACATTGCAGCCATCAGCGCTCGCTTTGTGCAGCTCCAACACAATGACA TTGACAAACGGGTGGAAGTGAAGCCATATGTGCTGGATGATCAGATGTGTGATGAGTGCC AGGGCACACGCTGTGGTGGGAAGTTTGCCCCGTTCTTCTGTGCCAACGTCACCTGTCTGC AGTATTACTGCGAATATTGCTGGGCGAGCATACATTCCCGCGCCGGGCGGGAGTTCCACA AACCGCTGGTGAAGGAGGGAGGCGACCGCCCTCGTCACGTCCCGTTCCGCTGGAGCTGAG CCCAGAGCAGAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 14-136, gnl|bosTau2|chr6 (63393514-63393392) | |
| 14-136, gnl|canFam2|chr3 (68037959-68037805) | |
| 14-136, gnl|danRer3|chr7 (4620587-4620448) | |
| 14-136, gnl|dasNov1|scaffold_56183 (1201-1073) | |
| 14-136, gnl|echTel1|scaffold_276550 (1426-1272) | |
| 14-136, gnl|fr1|chrUn (37757772-37757639) | |
| 14-136, gnl|galGal2|chr4 (77151558-77151406) | |
| 14-136, gnl|hg17|chr4 (14736304-14736458) | |
| 14-136, gnl|Hg17|chr4 (14736312-14736434) | |
| 14-136, gnl|loxAfr1|scaffold_36 (163011-163165) | |
| 14-136, gnl|mm7|chr5 (42600710-42600864) | |
| 14-136, gnl|Mm7|chr5 (42600718-42600840) | |
| 14-136, gnl|monDom2|scaffold_10 (24965585-24965433) | |
| 14-136, gnl|oryCun1|scaffold_213906 (1208-1054) | |
| 14-136, gnl|panTro1|chr3 (14983684-14983838) | |
| 14-136, gnl|rheMac2|chr5 (9857793-9857947) | |
| 14-136, gnl|rn3|chr14 (72966129-72965975) | |
| 14-136, gnl|tetNig1|chr1_random (1670259-1670407) | |
| 14-136, gnl|xenTro1|scaffold_158 (172661-172799) | |
| 431-665, gnl|bosTau2|chr6 (63493784-63493550) | |
| 431-665, gnl|Hg17|chr4 (14744045-14744279) | |
| 431-665, gnl|Mm7|chr5 (42605328-42605562) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 14-136, gnl|bosTau2|chr6 (63393514-63393392) | |
| 14-136, gnl|canFam2|chr3 (68037959-68037805) | |
| 14-136, gnl|danRer3|chr7 (4620587-4620448) | |
| 14-136, gnl|dasNov1|scaffold_56183 (1201-1073) | |
| 14-136, gnl|echTel1|scaffold_276550 (1426-1272) | |
| 14-136, gnl|fr1|chrUn (37757772-37757639) | |
| 14-136, gnl|galGal2|chr4 (77151558-77151406) | |
| 14-136, gnl|hg17|chr4 (14736304-14736458) | |
| 14-136, gnl|Hg17|chr4 (14736312-14736434) | |
| 14-136, gnl|loxAfr1|scaffold_36 (163011-163165) | |
| 14-136, gnl|mm7|chr5 (42600710-42600864) | |
| 14-136, gnl|Mm7|chr5 (42600718-42600840) | |
| 14-136, gnl|monDom2|scaffold_10 (24965585-24965433) | |
| 14-136, gnl|oryCun1|scaffold_213906 (1208-1054) | |
| 14-136, gnl|panTro1|chr3 (14983684-14983838) | |
| 14-136, gnl|rheMac2|chr5 (9857793-9857947) | |
| 14-136, gnl|rn3|chr14 (72966129-72965975) | |
| 14-136, gnl|tetNig1|chr1_random (1670259-1670407) | |
| 14-136, gnl|xenTro1|scaffold_158 (172661-172799) | |
| 431-665, gnl|bosTau2|chr6 (63493784-63493550) | |
| 431-665, gnl|Hg17|chr4 (14744045-14744279) | |
| 431-665, gnl|Mm7|chr5 (42605328-42605562) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) |