Non-Coding RNA Search

Ss1.1-Pig2-133B19.5

Sequence:


               
               GCGCTGTGCTGATCCACCCCGGAGGCTGCTCTGGGGCTCCGGGGCCTGCAAAGGGGCCCA
CCCGTCTCACGCCGGCTCCCCGCAGGTGGGAGGTGGACCCCGACTACTGCGAGGAGGTGA
AGCAGACGCCCCCCTACGACAGCAGCCACCGCATCCTGGACGTCATGGACATGACCATCT
TCGACTTCCTCATGGGGAACATGGACCGCCATCACTACGAGACGTTCGAGAAGTTTGGGA
ACGAAACGGTCATCATCCACTTGGACAACGGGAGAGGGTTTGGAAAATACTCCCACGACG
AGCTTTCCATCCTGGTGCCTCTACAGCAGTGCTGCAGGATCAGGAAGTCCACGTACCTGC
GGCTGCAGCTCCTGGCCAAGGAGGAGTACAAGCTGAGCCTGCTGATGGCCGAGTCCCTGC
GCACGGACCGCGTGGCCCCCGTGCTGTACCAGCCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGCTGTGCTGATCCACCCCGGAGGCTGCTCTGGGGCTCCGGGGCCTGCAAAGGGGCCCA
CCCGTCTCACGCCGGCTCCCCGCAGGTGGGAGGTGGACCCCGACTACTGCGAGGAGGTGA
AGCAGACGCCCCCCTACGACAGCAGCCACCGCATCCTGGACGTCATGGACATGACCATCT
TCGACTTCCTCATGGGGAACATGGACCGCCATCACTACGAGACGTTCGAGAAGTTTGGGA
ACGAAACGGTCATCATCCACTTGGACAACGGGAGAGGGTTTGGAAAATACTCCCACGACG
AGCTTTCCATCCTGGTGCCTCTACAGCAGTGCTGCAGGATCAGGAAGTCCACGTACCTGC
GGCTGCAGCTCCTGGCCAAGGAGGAGTACAAGCTGAGCCTGCTGATGGCCGAGTCCCTGC
GCACGGACCGCGTGGCCCCCGTGCTGTACCAGCCAC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61815986|ref|XP_607431.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61815986|ref|XP_607431.1|

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               4-196, gnl|bosTau2|chr4 (757645-757456)
               

               
               4-196, gnl|Mm7|chr5 (137779253-137779471)
               


               
               334-456, gnl|bosTau2|chr4 (756200-756078)
               

               
               334-456, gnl|Hg17|chr17 (64045480-64045359)
               

               
               334-456, gnl|Mm7|chr5 (137781214-137781336)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-196, gnl|bosTau2|chr4 (757645-757456)
               

               
               4-196, gnl|Mm7|chr5 (137779253-137779471)
               


               
               334-456, gnl|bosTau2|chr4 (756200-756078)
               

               
               334-456, gnl|Hg17|chr17 (64045480-64045359)
               

               
               334-456, gnl|Mm7|chr5 (137781214-137781336)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ese (0.126502)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	4-196, gnl\|bosTau2\|chr4 (757645-757456)
	4-196, gnl\|Mm7\|chr5 (137779253-137779471)

	334-456, gnl\|bosTau2\|chr4 (756200-756078)
	334-456, gnl\|Hg17\|chr17 (64045480-64045359)
	334-456, gnl\|Mm7\|chr5 (137781214-137781336)