Ss1.1-Pig2-133H02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGACTGCTCAAACCAAAAAGCAGGGGGGATCACATCTGACCAAGCTGCTGTTATTTCCAA GTTTTGGAAGAACCATAAGACAAAAATCAGAGAAAGCCTCATGAACCAGAGCCGCTGGGA CAGTGGGCTTCGGGGCTTGAGCTGGAGAGTTGATGGCAAATCTCAGTCAAGGCACTCAGC TCAAATACACACTCCTGGTGCCATAATGGAGCTGGAAATAGGAAAAAGTGGGCAGAAGCA AGACTGTCTGGTGTAACGAGTATTATACCTGAGTTGAGTGAGGGAACCATAGTTCTTAGA TGACTTCTGCTGATGGGATATGCTTTAAGTTGTCTACTGAACCTTCTCCTCAGTTACCGA ACTAAGGAATCTGAATTTCTGTGTTTGGAATTTGATGAGGTCAAGGTCAACCAAGTTCTG AAGAAGCTCTCAGAGGTAGAAGAAAGTATCAGCATACTGATGCAGCCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGACTGCTCAAACCAAAAAGCAGGGGGGATCACATCTGACCAAGCTGCTGTTATTTCCAA GTTTTGGAAGAACCATAAGACAAAAATCAGAGAAAGCCTCATGAACCAGAGCCGCTGGGA CAGTGGGCTTCGGGGCTTGAGCTGGAGAGTTGATGGCAAATCTCAGTCAAGGCACTCAGC TCAAATACACACTCCTGGTGCCATAATGGAGCTGGAAATAGGAAAAAGTGGGCAGAAGCA AGACTGTCTGGTGTAACGAGTATTATACCTGAGTTGAGTGAGGGAACCATAGTTCTTAGA TGACTTCTGCTGATGGGATATGCTTTAAGTTGTCTACTGAACCTTCTCCTCAGTTACCGA ACTAAGGAATCTGAATTTCTGTGTTTGGAATTTGATGAGGTCAAGGTCAACCAAGTTCTG AAGAAGCTCTCAGAGGTAGAAGAAAGTATCAGCATACTGATGCAGCCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 1-235, gnl|bosTau2|chr11 (40337318-40337553) | |
| 1-235, gnl|canFam2|chr10 (65118093-65118341) | |
| 1-235, gnl|danRer3|chr2 (13232513-13232752) | |
| 1-235, gnl|dasNov1|scaffold_88471 (3434-3692) | |
| 1-235, gnl|echTel1|scaffold_196669 (3233-2979) | |
| 1-235, gnl|fr1|chrUn (185660098-185659871) | |
| 1-235, gnl|galGal2|chr3 (8181299-8181047) | |
| 1-235, gnl|hg17|chr2 (62139430-62139688) | |
| 1-235, gnl|Hg17|chr2 (62139533-62139768) | |
| 1-235, gnl|loxAfr1|scaffold_10284 (7045-7299) | |
| 1-235, gnl|mm7|chr11 (22908757-22908499) | |
| 1-235, gnl|Mm7|chr11 (22908652-22908417) | |
| 1-235, gnl|monDom2|scaffold_1 (27091492-27091749) | |
| 1-235, gnl|oryCun1|scaffold_196186 (640-886) | |
| 1-235, gnl|panTro1|chr12 (64355536-64355794) | |
| 1-235, gnl|rn3|chr14 (103656035-103655780) | |
| 1-235, gnl|tetNig1|chrUn_random (105358513-105358725) | |
| 1-235, gnl|xenTro1|scaffold_562 (662594-662838) | |
| 365-468, gnl|bosTau2|chr11 (40438172-40438275) | |
| 365-468, gnl|canFam2|chr10 (65209729-65209886) | |
| 365-468, gnl|dasNov1|scaffold_49328 (2432-2265) | |
| 365-468, gnl|echTel1|scaffold_206264 (4585-4755) | |
| 365-468, gnl|hg17|chr2 (62274577-62274744) | |
| 365-468, gnl|Hg17|chr2 (62274615-62274717) | |
| 365-468, gnl|mm7|chr11 (22852105-22851904) | |
| 365-468, gnl|Mm7|chr11 (22852065-22851962) | |
| 365-468, gnl|monDom2|scaffold_1 (27235548-27235696) | |
| 365-468, gnl|oryCun1|scaffold_193930 (48688-48526) | |
| 365-468, gnl|panTro1|chr12 (64491679-64491846) | |
| 365-468, gnl|rn3|chr14 (103591011-103590858) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-235, gnl|bosTau2|chr11 (40337318-40337553) | |
| 1-235, gnl|canFam2|chr10 (65118093-65118341) | |
| 1-235, gnl|danRer3|chr2 (13232513-13232752) | |
| 1-235, gnl|dasNov1|scaffold_88471 (3434-3692) | |
| 1-235, gnl|echTel1|scaffold_196669 (3233-2979) | |
| 1-235, gnl|fr1|chrUn (185660098-185659871) | |
| 1-235, gnl|galGal2|chr3 (8181299-8181047) | |
| 1-235, gnl|hg17|chr2 (62139430-62139688) | |
| 1-235, gnl|Hg17|chr2 (62139533-62139768) | |
| 1-235, gnl|loxAfr1|scaffold_10284 (7045-7299) | |
| 1-235, gnl|mm7|chr11 (22908757-22908499) | |
| 1-235, gnl|Mm7|chr11 (22908652-22908417) | |
| 1-235, gnl|monDom2|scaffold_1 (27091492-27091749) | |
| 1-235, gnl|oryCun1|scaffold_196186 (640-886) | |
| 1-235, gnl|panTro1|chr12 (64355536-64355794) | |
| 1-235, gnl|rn3|chr14 (103656035-103655780) | |
| 1-235, gnl|tetNig1|chrUn_random (105358513-105358725) | |
| 1-235, gnl|xenTro1|scaffold_562 (662594-662838) | |
| 365-468, gnl|bosTau2|chr11 (40438172-40438275) | |
| 365-468, gnl|canFam2|chr10 (65209729-65209886) | |
| 365-468, gnl|dasNov1|scaffold_49328 (2432-2265) | |
| 365-468, gnl|echTel1|scaffold_206264 (4585-4755) | |
| 365-468, gnl|hg17|chr2 (62274577-62274744) | |
| 365-468, gnl|Hg17|chr2 (62274615-62274717) | |
| 365-468, gnl|mm7|chr11 (22852105-22851904) | |
| 365-468, gnl|Mm7|chr11 (22852065-22851962) | |
| 365-468, gnl|monDom2|scaffold_1 (27235548-27235696) | |
| 365-468, gnl|oryCun1|scaffold_193930 (48688-48526) | |
| 365-468, gnl|panTro1|chr12 (64491679-64491846) | |
| 365-468, gnl|rn3|chr14 (103591011-103590858) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ova (0.129132) |