Non-Coding RNA Search

Ss1.1-Pig2-137P24.5

Sequence:


               
               ACAAGCATTCAGAAACACAAGCAGCGCTGCCCAGTGCTGGAGGACCAGTTGGTGGATCTG
GTAGTTTATGCCATGGAGCGATCTGAGACGGAGGAGAAGTTTGATGATGGGGGAACAAGC
CAACTCCTGTGGCAGCATCTCTCAAGTCAGCTCATTTTCTTTGTGCTTTTCCAGTTTGCA
AGTTTTCCTCATATGGTCCTTTCTCTTCATCAGAAGTTAGCAGGGCGAGGACTGATTAAA
GGCAGAGATCACCTGATGTGGGTTCTCTTACAATTCATTTCTGGAAGTATTCAGAAAAAT
GCGCTAGCTGATTTTCTCCCTGTCATGAAGCTCTTTGATCTTCTGTACCCAGAAAAAGAA
TTTATCCCAGTTCCTGACATTAACAAACCTCAGTCAACTCATGCCTTTGCAATGACCTGC
ATTTGGATTCACCTCAACAGAAAAGCCCAAAATGACAACTCCAAGCTACAGATTCCAATA
CCTCATTCCCTAAAACTTCACCATGAGTTCCTGCAGCAAAGTCTTAGAAATAAGAGTTTA
CAGATGAATGACTATAAGATCGCCCTACTGTGTAATGCATATTCTACGAATTCAGAATGT
TTTACATTACCCATGGGAGCTCTGGTAGAAACTATTTATGGAAATGGAATTATGAGGATA
CCGCTTCCTGAAACGAGCTGTTTGGCTTCAGGATCTATTACTCCCTTACCAATGAACCTC
CTGGATTCACTGACAGTTCATGCCAAGATGAGCCTTATCCACAGCATTGCTACCAGAGTG
ATAAAACTTGCTCATGCAAAGTCCAGTGTGGCCTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAAGCATTCAGAAACACAAGCAGCGCTGCCCAGTGCTGGAGGACCAGTTGGTGGATCTG
GTAGTTTATGCCATGGAGCGATCTGAGACGGAGGAGAAGTTTGATGATGGGGGAACAAGC
CAACTCCTGTGGCAGCATCTCTCAAGTCAGCTCATTTTCTTTGTGCTTTTCCAGTTTGCA
AGTTTTCCTCATATGGTCCTTTCTCTTCATCAGAAGTTAGCAGGGCGAGGACTGATTAAA
GGCAGAGATCACCTGATGTGGGTTCTCTTACAATTCATTTCTGGAAGTATTCAGAAAAAT
GCGCTAGCTGATTTTCTCCCTGTCATGAAGCTCTTTGATCTTCTGTACCCAGAAAAAGAA
TTTATCCCAGTTCCTGACATTAACAAACCTCAGTCAACTCATGCCTTTGCAATGACCTGC
ATTTGGATTCACCTCAACAGAAAAGCCCAAAATGACAACTCCAAGCTACAGATTCCAATA
CCTCATTCCCTAAAACTTCACCATGAGTTCCTGCAGCAAAGTCTTAGAAATAAGAGTTTA
CAGATGAATGACTATAAGATCGCCCTACTGTGTAATGCATATTCTACGAATTCAGAATGT
TTTACATTACCCATGGGAGCTCTGGTAGAAACTATTTATGGAAATGGAATTATGAGGATA
CCGCTTCCTGAAACGAGCTGTTTGGCTTCAGGATCTATTACTCCCTTACCAATGAACCTC
CTGGATTCACTGACAGTTCATGCCAAGATGAGCCTTATCCACAGCATTGCTACCAGAGTG
ATAAAACTTGCTCATGCAAAGTCCAGTGTGGCCTTG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               16-219, gnl|bosTau2|chr9 (40047395-40047192)
               

               
               16-219, gnl|Hg17|chr6 (131973079-131972876)
               

               
               16-219, gnl|Mm7|chr10 (24641058-24641261)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-219, gnl|bosTau2|chr9 (40047395-40047192)
               

               
               16-219, gnl|Hg17|chr6 (131973079-131972876)
               

               
               16-219, gnl|Mm7|chr10 (24641058-24641261)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	16-219, gnl\|bosTau2\|chr9 (40047395-40047192)
	16-219, gnl\|Hg17\|chr6 (131973079-131972876)
	16-219, gnl\|Mm7\|chr10 (24641058-24641261)