Ss1.1-Pig2-138P04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTTTGTAAATGAAGAGCTGGTGTTATATCTATTACAGATGCTGAGTGTGGTGGTTTCCA TTTGTGTTGTATATGGCACCCATAATAGTCTACTCAAGAAACAAGGTCTGCCTCTTACTA ATCAGATTGCTAGCTGGATAATATTAGCCTCTTCCTTGGTCATACCTCTACTGAGTTCTC CGATTCTGTTTGATCGATTATTTAGCATTCTTCTTTCCTTGATGTCGACCTACCTACTTC TAAGCACAGGGTATGAAGCTCTTTTTCCATTAGTACTGTCATGTTTGATGTTTGTCTGGA TATACATGGAACAAGAAACCCTGCAGCAATCTGGTATTTCCTGTAAACAGAAGCTTTCCA CTATCCAGTTCGCCTGTAATACTGATTTAACCCAGTTTCGAGATTTCTCTCTGGATGACA TCCGTAGGGCCTTTTTCCTTGTTTTCTTCTTAGTGACAGCCTTTTTTGGAACTGGAAATA TAGCTTCTGTTAACAGCTTTGATCTTGCCTCTGTCTATTGCTTTCTGACCGTGTTTAGTC CTTATATGATGGGAGCCCTGATGATATGGAAGATTTTAATCCCCTTTGTTTTTGTGATGT GCGCTTTTGAAGCTGTTCAGTTAACTACCCAGTTAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTTTGTAAATGAAGAGCTGGTGTTATATCTATTACAGATGCTGAGTGTGGTGGTTTCCA TTTGTGTTGTATATGGCACCCATAATAGTCTACTCAAGAAACAAGGTCTGCCTCTTACTA ATCAGATTGCTAGCTGGATAATATTAGCCTCTTCCTTGGTCATACCTCTACTGAGTTCTC CGATTCTGTTTGATCGATTATTTAGCATTCTTCTTTCCTTGATGTCGACCTACCTACTTC TAAGCACAGGGTATGAAGCTCTTTTTCCATTAGTACTGTCATGTTTGATGTTTGTCTGGA TATACATGGAACAAGAAACCCTGCAGCAATCTGGTATTTCCTGTAAACAGAAGCTTTCCA CTATCCAGTTCGCCTGTAATACTGATTTAACCCAGTTTCGAGATTTCTCTCTGGATGACA TCCGTAGGGCCTTTTTCCTTGTTTTCTTCTTAGTGACAGCCTTTTTTGGAACTGGAAATA TAGCTTCTGTTAACAGCTTTGATCTTGCCTCTGTCTATTGCTTTCTGACCGTGTTTAGTC CTTATATGATGGGAGCCCTGATGATATGGAAGATTTTAATCCCCTTTGTTTTTGTGATGT GCGCTTTTGAAGCTGTTCAGTTAACTACCCAGTTAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 101-265, gnl|bosTau2|chr24 (44329168-44329331) | |
| 101-265, gnl|canFam2|chr1 (17769897-17769714) | |
| 101-265, gnl|canFam2|chr1 (17769889-17769743) | |
| 101-265, gnl|dasNov1|scaffold_8986 (46577-46377) | |
| 101-265, gnl|dasNov1|scaffold_8986 (46534-46388) | |
| 101-265, gnl|echTel1|scaffold_310564 (6494-6341) | |
| 101-265, gnl|echTel1|scaffold_310564 (6500-6355) | |
| 101-265, gnl|fr1|chrUn (83147385-83147245) | |
| 101-265, gnl|hg17|chr18 (57914043-57914188) | |
| 101-265, gnl|Hg17|chr18 (57914207-57914048) | |
| 101-265, gnl|hg17|chr22 (30999828-31000054) | |
| 101-265, gnl|loxAfr1|scaffold_9867 (41543-41334) | |
| 101-265, gnl|loxAfr1|scaffold_9867 (41521-41374) | |
| 101-265, gnl|mm7|chr1 (105465307-105465452) | |
| 101-265, gnl|mm7|chr1 (105465314-105465452) | |
| 101-265, gnl|Mm7|chr1 (105465449-105465155) | |
| 101-265, gnl|monDom2|scaffold_4 (65574560-65574695) | |
| 101-265, gnl|oryCun1|scaffold_181982 (8000-7807) | |
| 101-265, gnl|oryCun1|scaffold_181982 (7977-7832) | |
| 101-265, gnl|panTro1|chr17 (54809986-54810131) | |
| 101-265, gnl|panTro1|chr23 (31155678-31155904) | |
| 101-265, gnl|rn3|chr13 (11705805-11705947) | |
| 101-265, gnl|rn3|chr13 (11705807-11705946) | |
| 101-265, gnl|tetNig1|chr6 (841219-841336) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 101-265, gnl|bosTau2|chr24 (44329168-44329331) | |
| 101-265, gnl|canFam2|chr1 (17769897-17769714) | |
| 101-265, gnl|canFam2|chr1 (17769889-17769743) | |
| 101-265, gnl|dasNov1|scaffold_8986 (46577-46377) | |
| 101-265, gnl|dasNov1|scaffold_8986 (46534-46388) | |
| 101-265, gnl|echTel1|scaffold_310564 (6494-6341) | |
| 101-265, gnl|echTel1|scaffold_310564 (6500-6355) | |
| 101-265, gnl|fr1|chrUn (83147385-83147245) | |
| 101-265, gnl|hg17|chr18 (57914043-57914188) | |
| 101-265, gnl|Hg17|chr18 (57914207-57914048) | |
| 101-265, gnl|hg17|chr22 (30999828-31000054) | |
| 101-265, gnl|loxAfr1|scaffold_9867 (41543-41334) | |
| 101-265, gnl|loxAfr1|scaffold_9867 (41521-41374) | |
| 101-265, gnl|mm7|chr1 (105465307-105465452) | |
| 101-265, gnl|mm7|chr1 (105465314-105465452) | |
| 101-265, gnl|Mm7|chr1 (105465449-105465155) | |
| 101-265, gnl|monDom2|scaffold_4 (65574560-65574695) | |
| 101-265, gnl|oryCun1|scaffold_181982 (8000-7807) | |
| 101-265, gnl|oryCun1|scaffold_181982 (7977-7832) | |
| 101-265, gnl|panTro1|chr17 (54809986-54810131) | |
| 101-265, gnl|panTro1|chr23 (31155678-31155904) | |
| 101-265, gnl|rn3|chr13 (11705805-11705947) | |
| 101-265, gnl|rn3|chr13 (11705807-11705946) | |
| 101-265, gnl|tetNig1|chr6 (841219-841336) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) | |
| rec (0.17307) |