Non-Coding RNA Search

Ss1.1-Pig2-13O07.5

Sequence:


               
               CTGCGAGCCGCCTGCGCACCGGCCGAGTCCCGGTTCTCTGCGTTGGCCGCCGTCCTCACC
GTCCCCTTCCCCCGACCCTCTCGCAGCCTCCCCTTCCTTTCCCCCTCGGAAAATGGTTCC
TGCTGCCGGGCGAGATGTGTACATCTCATGACTGAGAGGAAGAAACTAGTCATGGGTCAG
AGGCCAAGATACTTCCCTGGGAAATGCTGCTGATGCTGCTTGACGAAGTCAAACAATGAG
TGTTTGGTTTAAGAAAGATTTTCATATTTAAAAGATTTTCATCTTGGAAATACTGTCAAG
TGAAAATTAGAGTCTTTTGGGAAACATTTTCCTCCTGATAAATTATACTTGTGATGGGCG
ACATGGCAAACAACTCGGTTGCCTATGGTGGAGTGAAAAACTCCTTGAAGGAGGCCAATC
ATGACGGAGACTTTGGAATTACCCTCGCGGAGCTGCGCGCTCTCATGGAGCTCAGGTCGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCGAGCCGCCTGCGCACCGGCCGAGTCCCGGTTCTCTGCGTTGGCCGCCGTCCTCACC
GTCCCCTTCCCCCGACCCTCTCGCAGCCTCCCCTTCCTTTCCCCCTCGGAAAATGGTTCC
TGCTGCCGGGCGAGATGTGTACATCTCATGACTGAGAGGAAGAAACTAGTCATGGGTCAG
AGGCCAAGATACTTCCCTGGGAAATGCTGCTGATGCTGCTTGACGAAGTCAAACAATGAG
TGTTTGGTTTAAGAAAGATTTTCATATTTAAAAGATTTTCATCTTGGAAATACTGTCAAG
TGAAAATTAGAGTCTTTTGGGAAACATTTTCCTCCTGATAAATTATACTTGTGATGGGCG
ACATGGCAAACAACTCGGTTGCCTATGGTGGAGTGAAAAACTCCTTGAAGGAGGCCAATC
ATGACGGAGACTTTGGAATTACCCTCGCGGAGCTGCGCGCTCTCATGGAGCTCAGGTCGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               133-478, gnl|bosTau2|chr5 (12440497-12440843)
               

               
               133-478, gnl|Hg17|chr12 (88552354-88552007)
               

               
               133-478, gnl|Mm7|chr10 (98531179-98531528)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               133-478, gnl|bosTau2|chr5 (12440497-12440843)
               

               
               133-478, gnl|Hg17|chr12 (88552354-88552007)
               

               
               133-478, gnl|Mm7|chr10 (98531179-98531528)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cki (0.165235)
               

               
               spl (0.143184)
               

               
               jej (0.0989218)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)
               

               
               spl (0.143184)
               

               
               jej (0.0989218)

	133-478, gnl\|bosTau2\|chr5 (12440497-12440843)
	133-478, gnl\|Hg17\|chr12 (88552354-88552007)
	133-478, gnl\|Mm7\|chr10 (98531179-98531528)