Ss1.1-Pig2-141M08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTCGGCTCCGTGCGGCTGATGAGCTGATGTGCATTGATGGAATTCCTGTTAAAGGGAAAT CACACAAACAAGTCCTAGACCTAATGACAACTGCTGCTCGAAATGGCCACGTGTTATTAA CTGTCAGAAGAAAGATCTTCTATGGTGAGAAACAACCTGAGGATGACAGCTCTCAAGCCT TCCTTTCAACACAGAATGGATCTCCCCGCCTGAACCGAGCAGAGGTCCCAGCCAGGCCTG CTCCCCAGGAGGCCTATGATGTTGTGTTGCAACGGAAAGAAAATGAAGGATTTGGCTTTG TCATTCTAACTTCCAAAAACAAACCACCTCCAGGAGTTATTCCTCATAAGATTGGCCGAG TCATAGAAGGAAGTCCAGCTGATCGCTGTGGAAAGCTGAAAGTTGGAGACCATATCTCTG CTGTAAACGGGCAGTCCATTGTTGAATTGTCCCATGATAACATTGTTCAGCTGATCAAAG ATGCTGGTGTCACTGTCACATTAACGGTCGTCGCTGAAGAAGAGCATCTAGGCCCACCCT CGGGAACAAACTCCGCCAGGCAAAGCCCAGCCCTGCAGCACCGGCCCATGGGACAGTCAC AGGCCAACCACCTGCCTGGGGACAGAAGCGCCACAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTCGGCTCCGTGCGGCTGATGAGCTGATGTGCATTGATGGAATTCCTGTTAAAGGGAAAT CACACAAACAAGTCCTAGACCTAATGACAACTGCTGCTCGAAATGGCCACGTGTTATTAA CTGTCAGAAGAAAGATCTTCTATGGTGAGAAACAACCTGAGGATGACAGCTCTCAAGCCT TCCTTTCAACACAGAATGGATCTCCCCGCCTGAACCGAGCAGAGGTCCCAGCCAGGCCTG CTCCCCAGGAGGCCTATGATGTTGTGTTGCAACGGAAAGAAAATGAAGGATTTGGCTTTG TCATTCTAACTTCCAAAAACAAACCACCTCCAGGAGTTATTCCTCATAAGATTGGCCGAG TCATAGAAGGAAGTCCAGCTGATCGCTGTGGAAAGCTGAAAGTTGGAGACCATATCTCTG CTGTAAACGGGCAGTCCATTGTTGAATTGTCCCATGATAACATTGTTCAGCTGATCAAAG ATGCTGGTGTCACTGTCACATTAACGGTCGTCGCTGAAGAAGAGCATCTAGGCCCACCCT CGGGAACAAACTCCGCCAGGCAAAGCCCAGCCCTGCAGCACCGGCCCATGGGACAGTCAC AGGCCAACCACCTGCCTGGGGACAGAAGCGCCACAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 147-339, gnl|bosTau2|chr3 (24634324-24634132) | |
| 147-339, gnl|Hg17|chr1 (113908493-113908685) | |
| 147-339, gnl|Mm7|chr3 (103828173-103827987) | |
| 521-625, gnl|bosTau2|chr3 (24617461-24617357) | |
| 521-625, gnl|canFam2|chr17 (65144143-65144008) | |
| 521-625, gnl|danRer3|chr23 (35041483-35041584) | |
| 521-625, gnl|dasNov1|scaffold_3473 (25047-25182) | |
| 521-625, gnl|echTel1|scaffold_322931 (1662-1528) | |
| 521-625, gnl|fr1|chrUn (40222028-40222151) | |
| 521-625, gnl|galGal2|chr26 (2273430-2273565) | |
| 521-625, gnl|hg17|chr1 (113926368-113926503) | |
| 521-625, gnl|Hg17|chr1 (113926396-113926500) | |
| 521-625, gnl|loxAfr1|scaffold_77383 (4607-4474) | |
| 521-625, gnl|mm7|chr3 (103815893-103815758) | |
| 521-625, gnl|Mm7|chr3 (103815863-103815759) | |
| 521-625, gnl|monDom2|scaffold_0 (1493554-1493418) | |
| 521-625, gnl|oryCun1|scaffold_181191 (4172-4037) | |
| 521-625, gnl|panTro1|chr1 (113713746-113713881) | |
| 521-625, gnl|rheMac2|chr1 (116656112-116656247) | |
| 521-625, gnl|rn3|chr2 (199221829-199221694) | |
| 521-625, gnl|xenTro1|scaffold_11 (1390557-1390432) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 147-339, gnl|bosTau2|chr3 (24634324-24634132) | |
| 147-339, gnl|Hg17|chr1 (113908493-113908685) | |
| 147-339, gnl|Mm7|chr3 (103828173-103827987) | |
| 521-625, gnl|bosTau2|chr3 (24617461-24617357) | |
| 521-625, gnl|canFam2|chr17 (65144143-65144008) | |
| 521-625, gnl|danRer3|chr23 (35041483-35041584) | |
| 521-625, gnl|dasNov1|scaffold_3473 (25047-25182) | |
| 521-625, gnl|echTel1|scaffold_322931 (1662-1528) | |
| 521-625, gnl|fr1|chrUn (40222028-40222151) | |
| 521-625, gnl|galGal2|chr26 (2273430-2273565) | |
| 521-625, gnl|hg17|chr1 (113926368-113926503) | |
| 521-625, gnl|Hg17|chr1 (113926396-113926500) | |
| 521-625, gnl|loxAfr1|scaffold_77383 (4607-4474) | |
| 521-625, gnl|mm7|chr3 (103815893-103815758) | |
| 521-625, gnl|Mm7|chr3 (103815863-103815759) | |
| 521-625, gnl|monDom2|scaffold_0 (1493554-1493418) | |
| 521-625, gnl|oryCun1|scaffold_181191 (4172-4037) | |
| 521-625, gnl|panTro1|chr1 (113713746-113713881) | |
| 521-625, gnl|rheMac2|chr1 (116656112-116656247) | |
| 521-625, gnl|rn3|chr2 (199221829-199221694) | |
| 521-625, gnl|xenTro1|scaffold_11 (1390557-1390432) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) |