Non-Coding RNA Search

Ss1.1-Pig2-141M10.5

Sequence:


               
               TCAGAAGGAAAAGTCAAGGAGGACGAAATGCACTGAAATACGAACACAAGGAGCTGGAGT
ATGTAGAAACCATTACCTCTCGCCAGAATGAAATCCAGAAATTTATTGCAGACGGCTGCA
AAGAAGCCCTGCTGGAAGAGAAGAGGCGCTTCTGCTTTCTGGTGGACAAACACTGCAGCT
TTGCGAGTCACATACAGAATTACCACGTGCAGTCTGCAGAGCTGATCAACTCCAAACTGC
CGAGGTGGCAGGAGACCTGCGGCGACGCCACGAAGGTGCCAGAGAAAGTCATGCATATGA
TCGAAGAAATCAGGACCCCGGCGACCACCCCCCTGTCTGGAACGCCGCTGCCGTCCCCCG
TGGTCGAGAGAAGCAGCGTGGTCGGGCGAGACTATGACACCCTTTCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGAAGGAAAAGTCAAGGAGGACGAAATGCACTGAAATACGAACACAAGGAGCTGGAGT
ATGTAGAAACCATTACCTCTCGCCAGAATGAAATCCAGAAATTTATTGCAGACGGCTGCA
AAGAAGCCCTGCTGGAAGAGAAGAGGCGCTTCTGCTTTCTGGTGGACAAACACTGCAGCT
TTGCGAGTCACATACAGAATTACCACGTGCAGTCTGCAGAGCTGATCAACTCCAAACTGC
CGAGGTGGCAGGAGACCTGCGGCGACGCCACGAAGGTGCCAGAGAAAGTCATGCATATGA
TCGAAGAAATCAGGACCCCGGCGACCACCCCCCTGTCTGGAACGCCGCTGCCGTCCCCCG
TGGTCGAGAGAAGCAGCGTGGTCGGGCGAGACTATGACACCCTTTCTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               58-222, gnl|bosTau2|chr24 (42090345-42090179)
               

               
               58-222, gnl|Hg17|chr7 (97589577-97589412)
               

               
               58-222, gnl|Mm7|chr5 (143312627-143312453)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               58-222, gnl|bosTau2|chr24 (42090345-42090179)
               

               
               58-222, gnl|Hg17|chr7 (97589577-97589412)
               

               
               58-222, gnl|Mm7|chr5 (143312627-143312453)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nco (0.161734)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)
               

               
               cty (0.10408)

	58-222, gnl\|bosTau2\|chr24 (42090345-42090179)
	58-222, gnl\|Hg17\|chr7 (97589577-97589412)
	58-222, gnl\|Mm7\|chr5 (143312627-143312453)