Non-Coding RNA Search

Ss1.1-Pig2-142L03.5

Sequence:


               
               TGAATTGTACCAGAGCCCTTNGAAACATAANTATAA------------AANGGGCTTTAA
NCGTCACATTTACAAAGGGGAAGACAGACAGGATTTGGAGTTTANTCA------------
TCATCATNTGGGGAGGACAGCTGCAGATTGACAGCG------------CACTTGGACTAA
------------GCGGGGGTGCAGCCTGGAGAATCCTNTCTACAGGGGAGGGCTTTCTCC
ATCAAGNACAGAGAGCCCGGGGAGCGAAACACCGCCGCTTAAAGGAGGGCACGTCCAGGG
TTGGAGTGGATGGGTGTTCAGCCTAGGGCATTAAGATCTTCCACTTCCAGTGAGGCCAAC
GCAGACCAGACTGACTTCCCTGATTTTGCACTTGGCTGGTTTATGCCTCTGAGATCCAGG
CCACAGCTATATTTTATTTCACTTGTCACCGCTGCTCCCTCCCGCAATGAAACGACACTG
CCAGTGTCAGCTGTGTCCTTGGAAGGGAGATATTTATGAAGGGCAAGGAGGCAGCTCTTA
GAACCTGAAGATTCCACGTGGCTAATTGCAGGAAACGACTTGGGAGGGGCAGGCTCTCGC
TCACTGTCAGGGCGGAAATGCCCTGTGAACTCCTCTGGGCCCTCATTTATCTCCCGAGCT
CCTGCTTGGCATGAGGCTCAGGAAGGCTGTTCACTCCGCTGTCCGACAAGTCAACATACA
TTAAAACGATGAGTCTTGTGCTACAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAATTGTACCAGAGCCCTTNGAAACATAANTATAA------------AANGGGCTTTAA
NCGTCACATTTACAAAGGGGAAGACAGACAGGATTTGGAGTTTANTCA------------
TCATCATNTGGGGAGGACAGCTGCAGATTGACAGCG------------CACTTGGACTAA
------------GCGGGGGTGCAGCCTGGAGAATCCTNTCTACAGGGGAGGGCTTTCTCC
ATCAAGNACAGAGAGCCCGGGGAGCGAAACACCGCCGCTTAAAGGAGGGCACGTCCAGGG
TTGGAGTGGATGGGTGTTCAGCCTAGGGCATTAAGATCTTCCACTTCCAGTGAGGCCAAC
GCAGACCAGACTGACTTCCCTGATTTTGCACTTGGCTGGTTTATGCCTCTGAGATCCAGG
CCACAGCTATATTTTATTTCACTTGTCACCGCTGCTCCCTCCCGCAATGAAACGACACTG
CCAGTGTCAGCTGTGTCCTTGGAAGGGAGATATTTATGAAGGGCAAGGAGGCAGCTCTTA
GAACCTGAAGATTCCACGTGGCTAATTGCAGGAAACGACTTGGGAGGGGCAGGCTCTCGC
TCACTGTCAGGGCGGAAATGCCCTGTGAACTCCTCTGGGCCCTCATTTATCTCCCGAGCT
CCTGCTTGGCATGAGGCTCAGGAAGGCTGTTCACTCCGCTGTCCGACAAGTCAACATACA
TTAAAACGATGAGTCTTGTGCTACAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               240-596, gnl|bosTau2|chr17 (35655677-35655323)
               

               
               240-596, gnl|Hg17|chr12 (108456826-108456468)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               240-596, gnl|bosTau2|chr17 (35655677-35655323)
               

               
               240-596, gnl|Hg17|chr12 (108456826-108456468)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eye (0.170503)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)

	240-596, gnl\|bosTau2\|chr17 (35655677-35655323)
	240-596, gnl\|Hg17\|chr12 (108456826-108456468)