Ss1.1-Pig2-142L19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCAGGCGGAGAATGAGCAAGAACTCTTAGCCATCAGCGCGCTGCGGAAGTGCCTGGAGC TAAAGCCTGATAACCGGACGGCACTGATGGCGCTAGCTGTGAGCTTCACCAACGAGTCCC TGCAGCGACAGGCCTGTGAGACCCTGCGAGACTGGCTGCGCTACACACCGGCCTATGCCC ACCTGGTGGTGCCTGCAGAGGAAGGGGCCGGCGGGGCAGGGCTGGGCCACAGCAAGCGCA TCCTGGGGTCTCTGTTGTCTGACTCCCTGTTTCTCGAAGTGAAGGAGCTCTTTCTGGCAG CTGTGCGCCTGGACCCTACATCCATTGACCCTGATGTGCAGTGTGGCTTGGGGGTCCTCT TCAACCTGAGTGGGGAGTATGACAAGGCAGTGGACTGTTTCACAGCCGCCCTCAGCGTTC GTCCCAATGACTACTTGCTGTGGAATAAGCTGGGGGCCACCCTGGCCAACGGAAACCAGA GTGAAGAAGCAGTAGCTGCGTACCGTCGGGCCCTCGAGCTCCAGCCTGGCTACATACGGT CCCGCTACAATCTGGGCATCAGCTGCATCAACCTCGGGGCCCACCGGGAGGCTGTGGAAC ACTTTTTGGAAGCTTTGAACATGCAGAGGAAAAGCCGGGGCCCTCGGGGCGAAGGGGGTG CCATGTCAAAGAACATCTGGAGCACCCTGCGTCTGGCCCTGTCTATGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCAGGCGGAGAATGAGCAAGAACTCTTAGCCATCAGCGCGCTGCGGAAGTGCCTGGAGC TAAAGCCTGATAACCGGACGGCACTGATGGCGCTAGCTGTGAGCTTCACCAACGAGTCCC TGCAGCGACAGGCCTGTGAGACCCTGCGAGACTGGCTGCGCTACACACCGGCCTATGCCC ACCTGGTGGTGCCTGCAGAGGAAGGGGCCGGCGGGGCAGGGCTGGGCCACAGCAAGCGCA TCCTGGGGTCTCTGTTGTCTGACTCCCTGTTTCTCGAAGTGAAGGAGCTCTTTCTGGCAG CTGTGCGCCTGGACCCTACATCCATTGACCCTGATGTGCAGTGTGGCTTGGGGGTCCTCT TCAACCTGAGTGGGGAGTATGACAAGGCAGTGGACTGTTTCACAGCCGCCCTCAGCGTTC GTCCCAATGACTACTTGCTGTGGAATAAGCTGGGGGCCACCCTGGCCAACGGAAACCAGA GTGAAGAAGCAGTAGCTGCGTACCGTCGGGCCCTCGAGCTCCAGCCTGGCTACATACGGT CCCGCTACAATCTGGGCATCAGCTGCATCAACCTCGGGGCCCACCGGGAGGCTGTGGAAC ACTTTTTGGAAGCTTTGAACATGCAGAGGAAAAGCCGGGGCCCTCGGGGCGAAGGGGGTG CCATGTCAAAGAACATCTGGAGCACCCTGCGTCTGGCCCTGTCTATGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 50-262, gnl|bosTau2|chr5 (59964387-59964175) | |
| 50-262, gnl|canFam2|chr27 (40874425-40874283) | |
| 50-262, gnl|danRer3|chr16 (6569867-6569745) | |
| 50-262, gnl|dasNov1|scaffold_31136 (8077-8219) | |
| 50-262, gnl|echTel1|scaffold_281168 (697-555) | |
| 50-262, gnl|fr1|chrUn (75019873-75020017) | |
| 50-262, gnl|galGal2|chr1 (71525389-71525521) | |
| 50-262, gnl|hg17|chr12 (7252318-7252460) | |
| 50-262, gnl|Hg17|chr12 (7252320-7252532) | |
| 50-262, gnl|loxAfr1|scaffold_11574 (15058-15200) | |
| 50-262, gnl|mm7|chr6 (124381758-124381616) | |
| 50-262, gnl|Mm7|chr6 (124381754-124381548) | |
| 50-262, gnl|monDom2|scaffold_31 (15796242-15796384) | |
| 50-262, gnl|oryCun1|scaffold_179224 (25675-25817) | |
| 50-262, gnl|panTro1|chr10 (7816027-7816169) | |
| 50-262, gnl|rheMac2|chr11 (7511675-7511817) | |
| 50-262, gnl|rn3|chr4 (160814842-160814700) | |
| 50-262, gnl|tetNig1|chr8 (9086776-9086920) | |
| 263-425, gnl|bosTau2|chr5 (59963947-59963785) | |
| 263-425, gnl|Hg17|chr12 (7252868-7253030) | |
| 263-425, gnl|Mm7|chr6 (124381246-124381084) | |
| 429-587, gnl|bosTau2|chr5 (59963467-59963309) | |
| 429-587, gnl|Hg17|chr12 (7253546-7253704) | |
| 429-587, gnl|Mm7|chr6 (124380801-124380643) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 50-262, gnl|bosTau2|chr5 (59964387-59964175) | |
| 50-262, gnl|canFam2|chr27 (40874425-40874283) | |
| 50-262, gnl|danRer3|chr16 (6569867-6569745) | |
| 50-262, gnl|dasNov1|scaffold_31136 (8077-8219) | |
| 50-262, gnl|echTel1|scaffold_281168 (697-555) | |
| 50-262, gnl|fr1|chrUn (75019873-75020017) | |
| 50-262, gnl|galGal2|chr1 (71525389-71525521) | |
| 50-262, gnl|hg17|chr12 (7252318-7252460) | |
| 50-262, gnl|Hg17|chr12 (7252320-7252532) | |
| 50-262, gnl|loxAfr1|scaffold_11574 (15058-15200) | |
| 50-262, gnl|mm7|chr6 (124381758-124381616) | |
| 50-262, gnl|Mm7|chr6 (124381754-124381548) | |
| 50-262, gnl|monDom2|scaffold_31 (15796242-15796384) | |
| 50-262, gnl|oryCun1|scaffold_179224 (25675-25817) | |
| 50-262, gnl|panTro1|chr10 (7816027-7816169) | |
| 50-262, gnl|rheMac2|chr11 (7511675-7511817) | |
| 50-262, gnl|rn3|chr4 (160814842-160814700) | |
| 50-262, gnl|tetNig1|chr8 (9086776-9086920) | |
| 263-425, gnl|bosTau2|chr5 (59963947-59963785) | |
| 263-425, gnl|Hg17|chr12 (7252868-7253030) | |
| 263-425, gnl|Mm7|chr6 (124381246-124381084) | |
| 429-587, gnl|bosTau2|chr5 (59963467-59963309) | |
| 429-587, gnl|Hg17|chr12 (7253546-7253704) | |
| 429-587, gnl|Mm7|chr6 (124380801-124380643) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) | |
| eru (0.120048) |