Non-Coding RNA Search

Ss1.1-Pig2-17M03.5

Sequence:


               
               TTTTTTCCTGCATCTGCATTATTTTATTTTGTGAAGGGGGACGGGTGGGAGGGACCTAGG
GGATTGGGACTGGGGTTTGGCTGAAAGAAAAACAAAAGTAACTGATGCGTCTAAACGACC
CACTGCACCCAGACCATGTATTCACGGTTCTAAGTTGCTCATTGTCAGTTCAAGCCAAAG
GTTACATTGTTAAGGGGATGCTTCCAATAGCATTTGTCCATCTGAGCTGAACGAAGCTGG
GCAAACGGCACCCTTTAAACCATTCCACCTGGCAGTATTCAGCTTCTCAACCAGCCGCTA
GTGATGTAGGCAAAAACAAAAAAAGAAAAAAGCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTCCTGCATCTGCATTATTTTATTTTGTGAAGGGGGACGGGTGGGAGGGACCTAGG
GGATTGGGACTGGGGTTTGGCTGAAAGAAAAACAAAAGTAACTGATGCGTCTAAACGACC
CACTGCACCCAGACCATGTATTCACGGTTCTAAGTTGCTCATTGTCAGTTCAAGCCAAAG
GTTACATTGTTAAGGGGATGCTTCCAATAGCATTTGTCCATCTGAGCTGAACGAAGCTGG
GCAAACGGCACCCTTTAAACCATTCCACCTGGCAGTATTCAGCTTCTCAACCAGCCGCTA
GTGATGTAGGCAAAAACAAAAAAAGAAAAAAGCAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-315, gnl|bosTau2|chr25 (6201573-6201893)
               

               
               1-315, gnl|Hg17|chr16 (7701145-7701458)
               

               
               1-315, gnl|Mm7|chr16 (7083491-7083825)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-315, gnl|bosTau2|chr25 (6201573-6201893)
               

               
               1-315, gnl|Hg17|chr16 (7701145-7701458)
               

               
               1-315, gnl|Mm7|chr16 (7083491-7083825)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nms (0.213858)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nms (0.213858)
               

               
               ecc (0.115035)

	1-315, gnl\|bosTau2\|chr25 (6201573-6201893)
	1-315, gnl\|Hg17\|chr16 (7701145-7701458)
	1-315, gnl\|Mm7\|chr16 (7083491-7083825)