Non-Coding RNA Search

Ss1.1-Pig2-1H18.5

Sequence:


               
               TCAGCTGGGTGCTCGGATGATGACCAAAATATGAGCCTGCTTCTGAAAGGCAGATACTAT
CAAAAATGGAATTTTGAGAGGTGAAAAAGAACATCTTGATGTATTCGGCTCCTTGTTAGA
ATGAAAAAACTAATGAATTACTGAATCAGTATGCCGGTGATATAAAAGAGAAGTGGAATT
CTAAAACTGAGCTAATTGGACCATCTCCTGAATTCTCATTAGGTAGAATCCTTGACAAAA
ACCAGAGGGCTACCCTGCATAGTGCTGTTAGGCAGAAATTTCCTTTTTTAATAACTGTAG
GAAAAAACAGTGAAATTGTTGTAAAACCAAATCTTGAGTGTAAAGAACTCTGTCACTTGG
TATCTGAAGAAGAAGCATTTGGCTTTTTTAAATATTTGGATGCACGGAAAGAAAATTCCA
AATTTACCTTTAAATCTGATACAGACAAAGAGCACAGAAAAGCTGTCCACCATTTTGTCA
ACAAAAAATTTGGAAATCTTGTGGAAACCAAATCTTTTCCTGAACTGAATTACGGTGCTG
ATAATCCAAATGTAGTGATTACAGTAAGATTTCGGGAAAAAGCACACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGCTGGGTGCTCGGATGATGACCAAAATATGAGCCTGCTTCTGAAAGGCAGATACTAT
CAAAAATGGAATTTTGAGAGGTGAAAAAGAACATCTTGATGTATTCGGCTCCTTGTTAGA
ATGAAAAAACTAATGAATTACTGAATCAGTATGCCGGTGATATAAAAGAGAAGTGGAATT
CTAAAACTGAGCTAATTGGACCATCTCCTGAATTCTCATTAGGTAGAATCCTTGACAAAA
ACCAGAGGGCTACCCTGCATAGTGCTGTTAGGCAGAAATTTCCTTTTTTAATAACTGTAG
GAAAAAACAGTGAAATTGTTGTAAAACCAAATCTTGAGTGTAAAGAACTCTGTCACTTGG
TATCTGAAGAAGAAGCATTTGGCTTTTTTAAATATTTGGATGCACGGAAAGAAAATTCCA
AATTTACCTTTAAATCTGATACAGACAAAGAGCACAGAAAAGCTGTCCACCATTTTGTCA
ACAAAAAATTTGGAAATCTTGTGGAAACCAAATCTTTTCCTGAACTGAATTACGGTGCTG
ATAATCCAAATGTAGTGATTACAGTAAGATTTCGGGAAAAAGCACACA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-588, gnl|bosTau2|chr5 (23415983-23415398)
               

               
               4-588, gnl|Hg17|chr12 (42435042-42434460)
               

               
               4-588, gnl|Mm7|chr15 (94544534-94543949)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-588, gnl|bosTau2|chr5 (23415983-23415398)
               

               
               4-588, gnl|Hg17|chr12 (42435042-42434460)
               

               
               4-588, gnl|Mm7|chr15 (94544534-94543949)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lin (0.145603)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)

	4-588, gnl\|bosTau2\|chr5 (23415983-23415398)
	4-588, gnl\|Hg17\|chr12 (42435042-42434460)
	4-588, gnl\|Mm7\|chr15 (94544534-94543949)