Non-Coding RNA Search

Ss1.1-Pig2-21G24.5

Sequence:


               
               GTCTTCTCTTTGGCCTAGTCACAAGGAATTCATAAACCTAGATAGGAATGTGTTTCCATC
CTCCCAGCCTGCAGATGTAAGTGGTTACTGTAGGAGCTGACCCAATTTAAGCCCAGAAGT
GTCAGTTCTCCTTATCTCAGCCCAAACAGGAATTAAGAAATATCCCAAATGTTGATGTTT
ATCCAAGCATTTGGGGGTGGGCGTGGGAGGGAAGTGATGCCCAGGAGATGAAACTGGAGT
AAGGAATATGTATGTTTTGGGGCCCACCCCCCAAGTTATTTCTACTCTCTTTGTTGTGAG
TGTTGTAACACTTGAAAAACTTTTGCCAGAGCTCTTTGGGACTGGGTGTTAAAGGAACCG
GTGATCCCTCTTGGGTAGTGTTCTGTAGTGCGTTGCCATGACCCACAGCCATGCAGGTCT
GCACCCCTTGCAAATGACACAACCTCAAAAGTAACAATGAAAAAAACACTCCACCAAGTA
GATGTCTTTTTGTTGCCACTCCGATTCAAATACAAACTTGGGCAGGGAGCATGTTTTTTG
TTCTATACAAAAACTAGCCAACTGTGGGTATTTCACATTTTAATTGTGAGATGACGTACA
TGTTCCTGAGGACTGAACTCAAATATGTCTTTTTCCTATATCAGTGTTGCTGACGGTTTT
AAAGACTATCAACGTTCTCCTGTTGTTTCTGTGCGCCACTATGGGAGCAGCTTTGGAGTG
GCCATAGAGGACAGCATCTCCATGACCTAACTGTATTTCACCCCCCTCTCCTTCCCTGCT
CTCCTGCCCCACCCCCAACTTGTTCCTGCTGCTGCTTTTTGGCTTCCAAGTGCCCCAGCC
ACCTCTCCAGACATGTACACTCCAGTTGGGAAATGAAAAGGGCAAGGGACAGACCAGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCTTCTCTTTGGCCTAGTCACAAGGAATTCATAAACCTAGATAGGAATGTGTTTCCATC
CTCCCAGCCTGCAGATGTAAGTGGTTACTGTAGGAGCTGACCCAATTTAAGCCCAGAAGT
GTCAGTTCTCCTTATCTCAGCCCAAACAGGAATTAAGAAATATCCCAAATGTTGATGTTT
ATCCAAGCATTTGGGGGTGGGCGTGGGAGGGAAGTGATGCCCAGGAGATGAAACTGGAGT
AAGGAATATGTATGTTTTGGGGCCCACCCCCCAAGTTATTTCTACTCTCTTTGTTGTGAG
TGTTGTAACACTTGAAAAACTTTTGCCAGAGCTCTTTGGGACTGGGTGTTAAAGGAACCG
GTGATCCCTCTTGGGTAGTGTTCTGTAGTGCGTTGCCATGACCCACAGCCATGCAGGTCT
GCACCCCTTGCAAATGACACAACCTCAAAAGTAACAATGAAAAAAACACTCCACCAAGTA
GATGTCTTTTTGTTGCCACTCCGATTCAAATACAAACTTGGGCAGGGAGCATGTTTTTTG
TTCTATACAAAAACTAGCCAACTGTGGGTATTTCACATTTTAATTGTGAGATGACGTACA
TGTTCCTGAGGACTGAACTCAAATATGTCTTTTTCCTATATCAGTGTTGCTGACGGTTTT
AAAGACTATCAACGTTCTCCTGTTGTTTCTGTGCGCCACTATGGGAGCAGCTTTGGAGTG
GCCATAGAGGACAGCATCTCCATGACCTAACTGTATTTCACCCCCCTCTCCTTCCCTGCT
CTCCTGCCCCACCCCCAACTTGTTCCTGCTGCTGCTTTTTGGCTTCCAAGTGCCCCAGCC
ACCTCTCCAGACATGTACACTCCAGTTGGGAAATGAAAAGGGCAAGGGACAGACCAGCTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               4-900, gnl|bosTau2|chr2 (82801751-82802629)
               

               
               4-900, gnl|Hg17|chr1 (23432462-23431533)
               

               
               4-900, gnl|Mm7|chr4 (135670951-135671998)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-900, gnl|bosTau2|chr2 (82801751-82802629)
               

               
               4-900, gnl|Hg17|chr1 (23432462-23431533)
               

               
               4-900, gnl|Mm7|chr4 (135670951-135671998)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pla (0.133672)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)
               

               
               ecc (0.115035)

	4-900, gnl\|bosTau2\|chr2 (82801751-82802629)
	4-900, gnl\|Hg17\|chr1 (23432462-23431533)
	4-900, gnl\|Mm7\|chr4 (135670951-135671998)