Non-Coding RNA Search

Ss1.1-Pig2-24P19.5.5

Sequence:


               
               GCAAATGTCATTCTTTCATTCTTTTTTACGCCTGAGTAATATTCCATTGTGTCTATGGAC
CACATCTTCTTGATCCATTCCTCTGTTGATGGACATTTAGGTTGTTTCCATGGCTTGGCT
GTTACAAATAGTGCTGCATGGATCTTTTGCAGTGGAAAATTTTGTCTGGATAGATGCCCA
GGAGTGGGATTACTAGATCCTATGGTAGTTGTATATTTAGTTTTCTGAGGTTGCAAGGAA
TATCCTATCCACATGATTGTGGGTCTGTGCAAGTGTGTGTGTTGCATTAATGCCCCCTGA
AGTGGGTTTTGTGAGACAAAAAAGCATGTGGATGTTTCATTTTTATGCCCAATCACCCCC
CAGAGAAGTTGTGCAAATTTGGAGTCTTGCCAGTCGTGGCTCAGATCTGTTTCCTTGCAG
CCCTGCCAGCTTTCGGACCAATTTCTGAGTTGAAAAACCATATTGAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAAATGTCATTCTTTCATTCTTTTTTACGCCTGAGTAATATTCCATTGTGTCTATGGAC
CACATCTTCTTGATCCATTCCTCTGTTGATGGACATTTAGGTTGTTTCCATGGCTTGGCT
GTTACAAATAGTGCTGCATGGATCTTTTGCAGTGGAAAATTTTGTCTGGATAGATGCCCA
GGAGTGGGATTACTAGATCCTATGGTAGTTGTATATTTAGTTTTCTGAGGTTGCAAGGAA
TATCCTATCCACATGATTGTGGGTCTGTGCAAGTGTGTGTGTTGCATTAATGCCCCCTGA
AGTGGGTTTTGTGAGACAAAAAAGCATGTGGATGTTTCATTTTTATGCCCAATCACCCCC
CAGAGAAGTTGTGCAAATTTGGAGTCTTGCCAGTCGTGGCTCAGATCTGTTTCCTTGCAG
CCCTGCCAGCTTTCGGACCAATTTCTGAGTTGAAAAACCATATTGAAT

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-230, gnl|bosTau2|chr1 (37886990-37887210)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-230, gnl|bosTau2|chr1 (37886990-37887210)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               hlv (0.278513)
               

               
               pla (0.133672)
               

               
               tra (0.123092)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hlv (0.278513)
               

               
               pla (0.133672)
               

               
               tra (0.123092)