Non-Coding RNA Search

Ss1.1-Pig2-27C15.5

Sequence:


               
               CACGAGTTTGGAGAGACTTCGGGTTTGGGATGACGTGCCAGTACCGCTCTGACTTCATCA
ACATCGGTGGGTTCGACCTGGACATCAAAGGCTGGGGTGGCGAGGACGTGCACCTTTACC
GCAAGTACCTGCACAGCAACCTGGTGGTGGTGCGGACACCGGTGCGCGGCCTCTTCCACC
TGTGGCATGAGAAGCGCTGCGTGGATGAGCTGACGCCGGAGCAGTACAAGATGTGCATGC
AGTCCAAGGCCATGAACGAGGCGTCCCACGGGCAGCTGGGGATGCTGGTCTTCAGGCACG
AGATCGAGGCCCACCTCCGCAAACAGAAGCAGAAGACAAGTAGCAAGAAAACATGAACTG
CCACGGATGGGTCTGTTTTGTTTTTTTCCCTTTGGTGATGAGCGAATGAGTGGCTGAGCA
AGATTTCCCTCCAGGGCGAGAAGAGAATTGGACTGATTAGGAAAACGGACGGAGGCTGAG
AGCCTCCTGGTTTCTCTCTGCCTCTTTAGCTTATGCAACAGGATCGACGCCCCCCATCAC
CACCCCTGGGCCGGCAGAAACAGCCCCAGCGCACCCCGGGTGGGGTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACGAGTTTGGAGAGACTTCGGGTTTGGGATGACGTGCCAGTACCGCTCTGACTTCATCA
ACATCGGTGGGTTCGACCTGGACATCAAAGGCTGGGGTGGCGAGGACGTGCACCTTTACC
GCAAGTACCTGCACAGCAACCTGGTGGTGGTGCGGACACCGGTGCGCGGCCTCTTCCACC
TGTGGCATGAGAAGCGCTGCGTGGATGAGCTGACGCCGGAGCAGTACAAGATGTGCATGC
AGTCCAAGGCCATGAACGAGGCGTCCCACGGGCAGCTGGGGATGCTGGTCTTCAGGCACG
AGATCGAGGCCCACCTCCGCAAACAGAAGCAGAAGACAAGTAGCAAGAAAACATGAACTG
CCACGGATGGGTCTGTTTTGTTTTTTTCCCTTTGGTGATGAGCGAATGAGTGGCTGAGCA
AGATTTCCCTCCAGGGCGAGAAGAGAATTGGACTGATTAGGAAAACGGACGGAGGCTGAG
AGCCTCCTGGTTTCTCTCTGCCTCTTTAGCTTATGCAACAGGATCGACGCCCCCCATCAC
CACCCCTGGGCCGGCAGAAACAGCCCCAGCGCACCCCGGGTGGGGTCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|7959793|gb|AAF71068.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|7959793|gb|AAF71068.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-344, gnl|bosTau2|chr17 (20101830-20102159)
               

               
               7-344, gnl|Hg17|chrX (100018321-100018658)
               

               
               7-344, gnl|Mm7|chr6 (118134864-118134578)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-344, gnl|bosTau2|chr17 (20101830-20102159)
               

               
               7-344, gnl|Hg17|chrX (100018321-100018658)
               

               
               7-344, gnl|Mm7|chr6 (118134864-118134578)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ese (0.126502)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	7-344, gnl\|bosTau2\|chr17 (20101830-20102159)
	7-344, gnl\|Hg17\|chrX (100018321-100018658)
	7-344, gnl\|Mm7\|chr6 (118134864-118134578)