Non-Coding RNA Search

Ss1.1-Pig2-29H01.5

Sequence:


               
               AACGGAACCAGGCCTGTTGGAACTCAGCCAGCGCTGGAGCTGCTGCACGTGCACAGGGCC
TGCTCACCTGGCCAGCCGGGCGACACCTTCTTCGTGCCCTGCCGAGGTCCTGAGCAGCTC
CCAGCCCCCCTCCAGCTCCATGCGCTGCACCACATCCTCGTTGCCGCCTCGGAGAAGCAC
GGCTTGCAGCGCATCCACCGCAGAGCTGTGGAGATGGGGTGGGGGTGTGTCTGGCGGGGC
TCCTGGGCCAGAGGCCCCTGTGTGCGCTCAGCTTTGCACCCCCGTGTGTGTTTTACGGGC
GGTCCTATGGGGCGCAGCTGCTGGGTCCCCCCCGCCTCAGCCCCAGAGTGGACCCTCTGG
TCACAGGCACACTGCTCCTGTTCCCTGTGCGCCTGAGGGCAGTGTCCCCAAGGCCCTCTG
GGGAGGGCAAAGCCTTCAGATGCTTTCAGGGTACCAACCAAGTGCTTGCTTCAGCTGCCT
TGAAGACCTTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACGGAACCAGGCCTGTTGGAACTCAGCCAGCGCTGGAGCTGCTGCACGTGCACAGGGCC
TGCTCACCTGGCCAGCCGGGCGACACCTTCTTCGTGCCCTGCCGAGGTCCTGAGCAGCTC
CCAGCCCCCCTCCAGCTCCATGCGCTGCACCACATCCTCGTTGCCGCCTCGGAGAAGCAC
GGCTTGCAGCGCATCCACCGCAGAGCTGTGGAGATGGGGTGGGGGTGTGTCTGGCGGGGC
TCCTGGGCCAGAGGCCCCTGTGTGCGCTCAGCTTTGCACCCCCGTGTGTGTTTTACGGGC
GGTCCTATGGGGCGCAGCTGCTGGGTCCCCCCCGCCTCAGCCCCAGAGTGGACCCTCTGG
TCACAGGCACACTGCTCCTGTTCCCTGTGCGCCTGAGGGCAGTGTCCCCAAGGCCCTCTG
GGGAGGGCAAAGCCTTCAGATGCTTTCAGGGTACCAACCAAGTGCTTGCTTCAGCTGCCT
TGAAGACCTTCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               58-236, gnl|bosTau2|chr14 (58277-58456)
               

               
               58-236, gnl|Hg17|chr8 (145453688-145453513)
               

               
               58-236, gnl|Mm7|chr15 (76532788-76532610)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               58-236, gnl|bosTau2|chr14 (58277-58456)
               

               
               58-236, gnl|Hg17|chr8 (145453688-145453513)
               

               
               58-236, gnl|Mm7|chr15 (76532788-76532610)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pty (0.142714)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pty (0.142714)

	58-236, gnl\|bosTau2\|chr14 (58277-58456)
	58-236, gnl\|Hg17\|chr8 (145453688-145453513)
	58-236, gnl\|Mm7\|chr15 (76532788-76532610)