Ss1.1-Pig2-29M07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCACGGAGGACCTGCGGGCTCTTAGTCGGCAAAACATAAGCCTGGACATCGCCACATTCA AGAAGCTGCAGACGGAGGTCTTGCGGAAGCTGACCATCGCTGAGGTGCAGAAACTTCTGG GTCCACACCTGGCGGGCCTGAAGGCGGAGGAGGAGAACAGCCCTGTGCGCGACTGGATCT CCCGGCAGCCGCAGGACGACCTGGACCGGCTGGGGCTGGGGCTCCAGGGCGGCATCCCCA ACGGCTACCTGGTCCTGGACATCAACATCCGAGAGGCCCCCTGGGGAGGCTCCCGCCCCC TCAGACCAGGACTTGCACCTGTGCTCACGCTGACCCCAAGTCTGCTCCTGGCCTTGATCC TGAAATGAGCCCACGGCTGCACCCTGGGGACTGCACCCTACTGTGGAGACCCCGCCTGGT GGGAGCAGACCTGGTGGCCCCCCCCGAGGACACCAGAGCTCAATAAAAGATCTGTTCCCA CTGAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCACGGAGGACCTGCGGGCTCTTAGTCGGCAAAACATAAGCCTGGACATCGCCACATTCA AGAAGCTGCAGACGGAGGTCTTGCGGAAGCTGACCATCGCTGAGGTGCAGAAACTTCTGG GTCCACACCTGGCGGGCCTGAAGGCGGAGGAGGAGAACAGCCCTGTGCGCGACTGGATCT CCCGGCAGCCGCAGGACGACCTGGACCGGCTGGGGCTGGGGCTCCAGGGCGGCATCCCCA ACGGCTACCTGGTCCTGGACATCAACATCCGAGAGGCCCCCTGGGGAGGCTCCCGCCCCC TCAGACCAGGACTTGCACCTGTGCTCACGCTGACCCCAAGTCTGCTCCTGGCCTTGATCC TGAAATGAGCCCACGGCTGCACCCTGGGGACTGCACCCTACTGTGGAGACCCCGCCTGGT GGGAGCAGACCTGGTGGCCCCCCCCGAGGACACCAGAGCTCAATAAAAGATCTGTTCCCA CTGAAAAAAAAA |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 79-263, gnl|bosTau2|chr25 (1149121-1148937) | |
| 79-263, gnl|canFam2|chr6 (42869509-42869383) | |
| 79-263, gnl|echTel1|scaffold_299810 (4542-4416) | |
| 79-263, gnl|galGal2|chr14 (8043940-8043816) | |
| 79-263, gnl|hg17|chr16 (758362-758488) | |
| 79-263, gnl|Hg17|chr16 (758372-758556) | |
| 79-263, gnl|loxAfr1|scaffold_27620 (26994-27123) | |
| 79-263, gnl|mm7|chr17 (23932346-23932221) | |
| 79-263, gnl|Mm7|chr17 (23932335-23932151) | |
| 79-263, gnl|monDom2|scaffold_943 (3423-3317) | |
| 79-263, gnl|rheMac2|chr20 (763241-763367) | |
| 79-263, gnl|rn3|chr10 (15017657-15017532) | |
| 79-263, gnl|xenTro1|scaffold_296 (451222-451343) | |
| 272-419, gnl|bosTau2|chr25 (1148853-1148708) | |
| 272-419, gnl|canFam2|chr6 (42869319-42869126) | |
| 272-419, gnl|hg17|chr16 (758552-758751) | |
| 272-419, gnl|Hg17|chr16 (758647-758783) | |
| 272-419, gnl|loxAfr1|scaffold_27620 (27187-27371) | |
| 272-419, gnl|mm7|chr17 (23932157-23931962) | |
| 272-419, gnl|Mm7|chr17 (23932072-23931926) | |
| 272-419, gnl|monDom2|scaffold_943 (3253-3027) | |
| 272-419, gnl|panTro1|chr18 (801829-802026) | |
| 272-419, gnl|rheMac2|chr20 (763431-763630) | |
| 272-419, gnl|rn3|chr10 (15017468-15017274) | |
| 272-419, gnl|xenTro1|scaffold_296 (451414-451652) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 79-263, gnl|bosTau2|chr25 (1149121-1148937) | |
| 79-263, gnl|canFam2|chr6 (42869509-42869383) | |
| 79-263, gnl|echTel1|scaffold_299810 (4542-4416) | |
| 79-263, gnl|galGal2|chr14 (8043940-8043816) | |
| 79-263, gnl|hg17|chr16 (758362-758488) | |
| 79-263, gnl|Hg17|chr16 (758372-758556) | |
| 79-263, gnl|loxAfr1|scaffold_27620 (26994-27123) | |
| 79-263, gnl|mm7|chr17 (23932346-23932221) | |
| 79-263, gnl|Mm7|chr17 (23932335-23932151) | |
| 79-263, gnl|monDom2|scaffold_943 (3423-3317) | |
| 79-263, gnl|rheMac2|chr20 (763241-763367) | |
| 79-263, gnl|rn3|chr10 (15017657-15017532) | |
| 79-263, gnl|xenTro1|scaffold_296 (451222-451343) | |
| 272-419, gnl|bosTau2|chr25 (1148853-1148708) | |
| 272-419, gnl|canFam2|chr6 (42869319-42869126) | |
| 272-419, gnl|hg17|chr16 (758552-758751) | |
| 272-419, gnl|Hg17|chr16 (758647-758783) | |
| 272-419, gnl|loxAfr1|scaffold_27620 (27187-27371) | |
| 272-419, gnl|mm7|chr17 (23932157-23931962) | |
| 272-419, gnl|Mm7|chr17 (23932072-23931926) | |
| 272-419, gnl|monDom2|scaffold_943 (3253-3027) | |
| 272-419, gnl|panTro1|chr18 (801829-802026) | |
| 272-419, gnl|rheMac2|chr20 (763431-763630) | |
| 272-419, gnl|rn3|chr10 (15017468-15017274) | |
| 272-419, gnl|xenTro1|scaffold_296 (451414-451652) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| amn (0.417711) |