Ss1.1-Pig2-2O07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGGGGAAGAGCGTGGAGGCCGAGCCGCGCGGCACCATCACGCTGGAGCTTCTCAAGCAC AAGGAAGCCTACACGTGGACCAACCCCACCTGCTGCGTCCACAACGTGATCATCGGGAAG CTGTGGATAGAGCAGTACGGCACGGTGGAGATCCTCAACCACAGAACTGGAGACAAGTGT ATACTTCACTTCAAACCCTGCGGACTGTTTGGAAAAGAGCTTCACAAAGTGGAAGGTCAC ATTCAAGACAAGAACAAAAAGAAGCTCTTTATGATCTATGGCAAGTGGACCGAGTGCTTG TGGGGCATAGACCCAGTTGCCTACGAGGCCTTCAGGAAGCAGGAGCGGAGAGGCGACCCC CCGAGGAAGGCGAAGTCGGATGCCGACCCCGAGAAGGCTGACGGCGATGGGGCGGACACC GTGCCCGGGGCTCAGGAGACGGTGCAGGTCATTCCAGGCAGCAAGCTCCTCTGGAGGGTC AACGCCCGGCCCCCCAACTCCGCCCAGATGTACAACTTCACCAGCTTCACCGTGAGTCTC AACGAGCTGGAGACGGGCATGGAGCAGACCCTGGCCCCCACGGACTGCCGCCTGCGCCCC GACATCCGGGGCATGGAGAACGGCAACATGGACCTAGCGAGCCAGGAGAAGGAGCGGCTG GAGGAGAAGCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGGGGAAGAGCGTGGAGGCCGAGCCGCGCGGCACCATCACGCTGGAGCTTCTCAAGCAC AAGGAAGCCTACACGTGGACCAACCCCACCTGCTGCGTCCACAACGTGATCATCGGGAAG CTGTGGATAGAGCAGTACGGCACGGTGGAGATCCTCAACCACAGAACTGGAGACAAGTGT ATACTTCACTTCAAACCCTGCGGACTGTTTGGAAAAGAGCTTCACAAAGTGGAAGGTCAC ATTCAAGACAAGAACAAAAAGAAGCTCTTTATGATCTATGGCAAGTGGACCGAGTGCTTG TGGGGCATAGACCCAGTTGCCTACGAGGCCTTCAGGAAGCAGGAGCGGAGAGGCGACCCC CCGAGGAAGGCGAAGTCGGATGCCGACCCCGAGAAGGCTGACGGCGATGGGGCGGACACC GTGCCCGGGGCTCAGGAGACGGTGCAGGTCATTCCAGGCAGCAAGCTCCTCTGGAGGGTC AACGCCCGGCCCCCCAACTCCGCCCAGATGTACAACTTCACCAGCTTCACCGTGAGTCTC AACGAGCTGGAGACGGGCATGGAGCAGACCCTGGCCCCCACGGACTGCCGCCTGCGCCCC GACATCCGGGGCATGGAGAACGGCAACATGGACCTAGCGAGCCAGGAGAAGGAGCGGCTG GAGGAGAAGCAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 43-164, gnl|bosTau2|chr13 (36087351-36087230) | |
| 43-164, gnl|Hg17|chr20 (60289494-60289616) | |
| 43-164, gnl|Mm7|chr2 (180651063-180651199) | |
| 255-379, gnl|bosTau2|chr13 (36085004-36084880) | |
| 255-379, gnl|canFam2|chr24 (49340525-49340680) | |
| 255-379, gnl|danRer3|chr23 (5697665-5697768) | |
| 255-379, gnl|dasNov1|scaffold_138811 (3529-3372) | |
| 255-379, gnl|echTel1|scaffold_270711 (660-503) | |
| 255-379, gnl|fr1|chrUn (125287749-125287616) | |
| 255-379, gnl|galGal2|chr20 (7544393-7544533) | |
| 255-379, gnl|hg17|chr20 (60292471-60292633) | |
| 255-379, gnl|Hg17|chr20 (60292497-60292621) | |
| 255-379, gnl|mm7|chr2 (180654095-180654247) | |
| 255-379, gnl|Mm7|chr2 (180654112-180654236) | |
| 255-379, gnl|monDom2|scaffold_1 (179796408-179796565) | |
| 255-379, gnl|oryCun1|scaffold_62917 (1170-1031) | |
| 255-379, gnl|panTro1|chr21 (63298792-63298949) | |
| 255-379, gnl|rheMac2|chr10 (2257836-2257679) | |
| 255-379, gnl|rn3|chr3 (169116667-169116820) | |
| 255-379, gnl|tetNig1|chr15 (6560726-6560585) | |
| 255-379, gnl|xenTro1|scaffold_220 (536349-536486) | |
| 500-631, gnl|bosTau2|chr13 (36082127-36081996) | |
| 500-631, gnl|canFam2|chr24 (49343438-49343589) | |
| 500-631, gnl|danRer3|chr23 (5704370-5704513) | |
| 500-631, gnl|dasNov1|scaffold_1668 (80510-80641) | |
| 500-631, gnl|fr1|chrUn (125287363-125287200) | |
| 500-631, gnl|galGal2|chr20 (7547206-7547356) | |
| 500-631, gnl|hg17|chr20 (60297636-60297788) | |
| 500-631, gnl|Hg17|chr20 (60297650-60297781) | |
| 500-631, gnl|loxAfr1|scaffold_54300 (9438-9285) | |
| 500-631, gnl|mm7|chr2 (180658721-180658872) | |
| 500-631, gnl|Mm7|chr2 (180658734-180658865) | |
| 500-631, gnl|monDom2|scaffold_1 (179802841-179802973) | |
| 500-631, gnl|panTro1|chr21 (63303778-63303930) | |
| 500-631, gnl|rheMac2|chr10 (2252815-2252664) | |
| 500-631, gnl|rn3|chr3 (169120463-169120614) | |
| 500-631, gnl|tetNig1|chr15 (6560293-6560160) | |
| 500-631, gnl|xenTro1|scaffold_220 (537204-537349) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 43-164, gnl|bosTau2|chr13 (36087351-36087230) | |
| 43-164, gnl|Hg17|chr20 (60289494-60289616) | |
| 43-164, gnl|Mm7|chr2 (180651063-180651199) | |
| 255-379, gnl|bosTau2|chr13 (36085004-36084880) | |
| 255-379, gnl|canFam2|chr24 (49340525-49340680) | |
| 255-379, gnl|danRer3|chr23 (5697665-5697768) | |
| 255-379, gnl|dasNov1|scaffold_138811 (3529-3372) | |
| 255-379, gnl|echTel1|scaffold_270711 (660-503) | |
| 255-379, gnl|fr1|chrUn (125287749-125287616) | |
| 255-379, gnl|galGal2|chr20 (7544393-7544533) | |
| 255-379, gnl|hg17|chr20 (60292471-60292633) | |
| 255-379, gnl|Hg17|chr20 (60292497-60292621) | |
| 255-379, gnl|mm7|chr2 (180654095-180654247) | |
| 255-379, gnl|Mm7|chr2 (180654112-180654236) | |
| 255-379, gnl|monDom2|scaffold_1 (179796408-179796565) | |
| 255-379, gnl|oryCun1|scaffold_62917 (1170-1031) | |
| 255-379, gnl|panTro1|chr21 (63298792-63298949) | |
| 255-379, gnl|rheMac2|chr10 (2257836-2257679) | |
| 255-379, gnl|rn3|chr3 (169116667-169116820) | |
| 255-379, gnl|tetNig1|chr15 (6560726-6560585) | |
| 255-379, gnl|xenTro1|scaffold_220 (536349-536486) | |
| 500-631, gnl|bosTau2|chr13 (36082127-36081996) | |
| 500-631, gnl|canFam2|chr24 (49343438-49343589) | |
| 500-631, gnl|danRer3|chr23 (5704370-5704513) | |
| 500-631, gnl|dasNov1|scaffold_1668 (80510-80641) | |
| 500-631, gnl|fr1|chrUn (125287363-125287200) | |
| 500-631, gnl|galGal2|chr20 (7547206-7547356) | |
| 500-631, gnl|hg17|chr20 (60297636-60297788) | |
| 500-631, gnl|Hg17|chr20 (60297650-60297781) | |
| 500-631, gnl|loxAfr1|scaffold_54300 (9438-9285) | |
| 500-631, gnl|mm7|chr2 (180658721-180658872) | |
| 500-631, gnl|Mm7|chr2 (180658734-180658865) | |
| 500-631, gnl|monDom2|scaffold_1 (179802841-179802973) | |
| 500-631, gnl|panTro1|chr21 (63303778-63303930) | |
| 500-631, gnl|rheMac2|chr10 (2252815-2252664) | |
| 500-631, gnl|rn3|chr3 (169120463-169120614) | |
| 500-631, gnl|tetNig1|chr15 (6560293-6560160) | |
| 500-631, gnl|xenTro1|scaffold_220 (537204-537349) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ese (0.126502) | |
| eru (0.120048) |