Non-Coding RNA Search

Ss1.1-Pig2-30H09.5

Sequence:


               
               GGAAATGCCCCCCCCACATGCAAAGTAATGGCTTCTGGAGGGACTGCCCCGTCTGGGATT
GGAGCCCTTCCAAAGGATCCAATGTGTACAGCTGGGGTTTGGGGTAAGCTTTGACTAAAT
TCAAAGGGAGGGAGGTCACAGGGAAAAAAAAAAAAACAAAAAAAACCAAGCCTATAAGTC
TACCCAGCCAGCCTGTTCCTTGGTCACTCAATTACTTTACCATTTATTTATTTATTCTCT
CAGGTGCACAGAATTGAGTTGACCATACTCCTCAGTTCTTGGCACGCTGTATCATCGTTG
GTCCAAGTGAGGCCCTTATGTTTTTTTGTTTTGTTTTCTTTTGTCCTCTTCACTACCCAT
CCCTGATTCCATCCCCCCTCCCACATAGGCACTCACTCTTGTGTATTTACTGTATGTCCT
TCCAGTCCATCGTTCATATGTTTATTTACATATATGTGTATCTGTGAAAAATGTATGGTA
TTGTGTGTTTTAATTTACATAAACAGTGTTGTACTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAATGCCCCCCCCACATGCAAAGTAATGGCTTCTGGAGGGACTGCCCCGTCTGGGATT
GGAGCCCTTCCAAAGGATCCAATGTGTACAGCTGGGGTTTGGGGTAAGCTTTGACTAAAT
TCAAAGGGAGGGAGGTCACAGGGAAAAAAAAAAAAACAAAAAAAACCAAGCCTATAAGTC
TACCCAGCCAGCCTGTTCCTTGGTCACTCAATTACTTTACCATTTATTTATTTATTCTCT
CAGGTGCACAGAATTGAGTTGACCATACTCCTCAGTTCTTGGCACGCTGTATCATCGTTG
GTCCAAGTGAGGCCCTTATGTTTTTTTGTTTTGTTTTCTTTTGTCCTCTTCACTACCCAT
CCCTGATTCCATCCCCCCTCCCACATAGGCACTCACTCTTGTGTATTTACTGTATGTCCT
TCCAGTCCATCGTTCATATGTTTATTTACATATATGTGTATCTGTGAAAAATGTATGGTA
TTGTGTGTTTTAATTTACATAAACAGTGTTGTACTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-516, gnl|bosTau2|chr25 (14035455-14034960)
               

               
               1-516, gnl|Hg17|chrX (52992324-52992814)
               

               
               1-516, gnl|Mm7|chrX (147102759-147102278)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-516, gnl|bosTau2|chr25 (14035455-14034960)
               

               
               1-516, gnl|Hg17|chrX (52992324-52992814)
               

               
               1-516, gnl|Mm7|chrX (147102759-147102278)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fbs (0.175346)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               eru (0.120048)

	1-516, gnl\|bosTau2\|chr25 (14035455-14034960)
	1-516, gnl\|Hg17\|chrX (52992324-52992814)
	1-516, gnl\|Mm7\|chrX (147102759-147102278)