Ss1.1-Pig2-32H06.5
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CTGGGAACAGCTGCCCCTGTCCAGGTCCAGCCCCAGCCAAGAGCTGCATCATGGAGGCTT
CCACAGACTTCCTGCCAGGCCTGAACTTCAGCAACTGCAGTCGACAGGCCCTGGAGAAAG
CCCTCCTGGGCGGGATGGGCAGCTGCCTCTTTGAACGGCTGTCCGGTCTGCCCTCTATGG
CCAGTGTCTGCGGAAATATGTTGGTGGAGCCCGGAGAGCAGTGTGACTGCGGCTTCCCTG
ATGACTGCACTGATCCCTGCTGCGATTACTTCACCTGCCAGCTGAGGCCCAGTGTGCACA
GTGCGCGTCTGACGGACTCTGTTGTCAAAATTGCCAGCTGCGCCCAGCTGGCTGGCAGTG
CCGCCCTCCCAGAGGTGACTGTGACTTGCCTGAGTTCTGCCCAGGAGACAGCTCCCAGTG
CCCCCCTGACATCAGCCTGGGGGACGGCGAGCCATGCGCTGGTGGAGAGGCTGTGTGCGT
GCACGGGCATTGCGCCTCGTATGCCCAGCAGTGCCAGGCTCTCTGGGGGCCTGGGGCCCA
GCCTGCCCCGCCGCCTTGCGTCCTTACTGCCAATACACGTGGGAACGC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CTGGGAACAGCTGCCCCTGTCCAGGTCCAGCCCCAGCCAAGAGCTGCATCATGGAGGCTT
CCACAGACTTCCTGCCAGGCCTGAACTTCAGCAACTGCAGTCGACAGGCCCTGGAGAAAG
CCCTCCTGGGCGGGATGGGCAGCTGCCTCTTTGAACGGCTGTCCGGTCTGCCCTCTATGG
CCAGTGTCTGCGGAAATATGTTGGTGGAGCCCGGAGAGCAGTGTGACTGCGGCTTCCCTG
ATGACTGCACTGATCCCTGCTGCGATTACTTCACCTGCCAGCTGAGGCCCAGTGTGCACA
GTGCGCGTCTGACGGACTCTGTTGTCAAAATTGCCAGCTGCGCCCAGCTGGCTGGCAGTG
CCGCCCTCCCAGAGGTGACTGTGACTTGCCTGAGTTCTGCCCAGGAGACAGCTCCCAGTG
CCCCCCTGACATCAGCCTGGGGGACGGCGAGCCATGCGCTGGTGGAGAGGCTGTGTGCGT
GCACGGGCATTGCGCCTCGTATGCCCAGCAGTGCCAGGCTCTCTGGGGGCCTGGGGCCCA
GCCTGCCCCGCCGCCTTGCGTCCTTACTGCCAATACACGTGGGAACGC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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83-243, gnl|bosTau2|chr3 (9146130-9146290) |
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83-243, gnl|Hg17|chr1 (151842752-151842912) |
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83-243, gnl|Mm7|chr3 (89471248-89471088) |
| |
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335-588, gnl|bosTau2|chr3 (9146753-9147006) |
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335-588, gnl|canFam2|chr7 (45409930-45409732) |
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335-588, gnl|danRer3|chrUn (26765736-26765933) |
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335-588, gnl|dasNov1|scaffold_56035 (13709-13907) |
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335-588, gnl|echTel1|scaffold_265060 (2941-2742) |
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335-588, gnl|fr1|chrUn (259508311-259508117) |
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335-588, gnl|hg17|chr1 (151843368-151843566) |
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335-588, gnl|Hg17|chr1 (151843397-151843650) |
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335-588, gnl|loxAfr1|scaffold_12583 (54665-54467) |
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335-588, gnl|mm7|chr3 (89470674-89470477) |
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335-588, gnl|Mm7|chr3 (89470644-89470391) |
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335-588, gnl|monDom2|scaffold_59 (2735849-2735665) |
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335-588, gnl|oryCun1|scaffold_61503 (1568-1373) |
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335-588, gnl|panTro1|chr1 (133832808-133833006) |
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335-588, gnl|rheMac2|chr9 (132920796-132920605) |
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335-588, gnl|rn3|chr2 (181481513-181481316) |
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335-588, gnl|tetNig1|chrUn_random (46978834-46979031) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
83-243, gnl|bosTau2|chr3 (9146130-9146290) |
|
83-243, gnl|Hg17|chr1 (151842752-151842912) |
|
83-243, gnl|Mm7|chr3 (89471248-89471088) |
| |
|
335-588, gnl|bosTau2|chr3 (9146753-9147006) |
|
335-588, gnl|canFam2|chr7 (45409930-45409732) |
|
335-588, gnl|danRer3|chrUn (26765736-26765933) |
|
335-588, gnl|dasNov1|scaffold_56035 (13709-13907) |
|
335-588, gnl|echTel1|scaffold_265060 (2941-2742) |
|
335-588, gnl|fr1|chrUn (259508311-259508117) |
|
335-588, gnl|hg17|chr1 (151843368-151843566) |
|
335-588, gnl|Hg17|chr1 (151843397-151843650) |
|
335-588, gnl|loxAfr1|scaffold_12583 (54665-54467) |
|
335-588, gnl|mm7|chr3 (89470674-89470477) |
|
335-588, gnl|Mm7|chr3 (89470644-89470391) |
|
335-588, gnl|monDom2|scaffold_59 (2735849-2735665) |
|
335-588, gnl|oryCun1|scaffold_61503 (1568-1373) |
|
335-588, gnl|panTro1|chr1 (133832808-133833006) |
|
335-588, gnl|rheMac2|chr9 (132920796-132920605) |
|
335-588, gnl|rn3|chr2 (181481513-181481316) |
|
335-588, gnl|tetNig1|chrUn_random (46978834-46979031) |
