Non-Coding RNA Search

Ss1.1-Pig2-33N10.5

Sequence:


               
               CTGTAAAAACTACACATGTCAATGTTTTACAGCTACGTAATTCGAATTGACTTGATTTTT
TCAAGTAATCCTAGAAAGGGGGAGCACTCCATATAGAAACTGCTGAAACTGCCACAGGTG
CTTCTCCGAAAACCTTACGGTTGTGGCATTGAATGTTCAGTATGGCTTCCTTTCTCCACA
CGAGGCATACTGTTGAGGTATTTGTTGCGGTGATTGGTTTTAATGCTAATCTAGGAATTC
AGATATAGATTCTTTAGATTTGCATGCTTTGCTTACCCTAATTTATGATATCTACCTTTT
TATTTGTAAACTAACAATAGTTGAGATCAGAATTTTAACAGAAATATTATTTATATAAAA
CTGTGGTTATCTCTTATTGTCACATGGCATTGACCAAAAGAAAACATCCGAAGGTGATGT
GACCACGCAGATCCTAAAAAGGATGTTTCAGCTGTTGCCCGATCCGTGGTTTTTCAAATT
AAAAAGAAAAAGAAAAACGTGCTAGACTGGCTTCTCACATCCTGATGTTGTGACCCTCTA
AGTGGAAAATAGACGGGGGATTAGTTGGCAGCAGAATAGGGGTTTGTTCTAAAGTTACTT
GAGGAGTCATTCTTGGGTATAGTAAGTTTTAACATTCTATTGAGAATTTTACTGCAGAAA
ATATATAAGCACTTATGTTGGAAGTTTAGTACAGATTTTTGAAAGTTTGATTTACTTTGC
CAGGTATTCAGCAGAATAAATAATTCGCAGTAAATATCATTCTCTGTCTTCCCCTGTTCT
CATTCCCATTTTGGAAGACCAGCAGGGGAGTCCTGTTGTGGCTCGGTGGTAACAAACACG
ACTAGCGTCCATGAGGATGCGGGGTCCGTCCTTTGCTTCGCTCGGTGGGTTAAGGATCCG
GCATTGCCACAAGCTGTGGTGTAGGTCGCAGACGTGGCTTGGATCCTGTGTTGCTGTGGC
TGGGGTATCGGCCGGCAGCTGGAGCTCTGATTTGACCCCTAGCCTGGGAACCTCCACGTG
CTGCAGGTGCGGCCCTAAAAAGCAAAAAAGAAAGAAGCAACCATAGGAGCTATTGGGAGA
AAATGGGTAGCCTTCCCAAAATGACTCTTCGTAGTTTCAGTGGACATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGTAAAAACTACACATGTCAATGTTTTACAGCTACGTAATTCGAATTGACTTGATTTTT
TCAAGTAATCCTAGAAAGGGGGAGCACTCCATATAGAAACTGCTGAAACTGCCACAGGTG
CTTCTCCGAAAACCTTACGGTTGTGGCATTGAATGTTCAGTATGGCTTCCTTTCTCCACA
CGAGGCATACTGTTGAGGTATTTGTTGCGGTGATTGGTTTTAATGCTAATCTAGGAATTC
AGATATAGATTCTTTAGATTTGCATGCTTTGCTTACCCTAATTTATGATATCTACCTTTT
TATTTGTAAACTAACAATAGTTGAGATCAGAATTTTAACAGAAATATTATTTATATAAAA
CTGTGGTTATCTCTTATTGTCACATGGCATTGACCAAAAGAAAACATCCGAAGGTGATGT
GACCACGCAGATCCTAAAAAGGATGTTTCAGCTGTTGCCCGATCCGTGGTTTTTCAAATT
AAAAAGAAAAAGAAAAACGTGCTAGACTGGCTTCTCACATCCTGATGTTGTGACCCTCTA
AGTGGAAAATAGACGGGGGATTAGTTGGCAGCAGAATAGGGGTTTGTTCTAAAGTTACTT
GAGGAGTCATTCTTGGGTATAGTAAGTTTTAACATTCTATTGAGAATTTTACTGCAGAAA
ATATATAAGCACTTATGTTGGAAGTTTAGTACAGATTTTTGAAAGTTTGATTTACTTTGC
CAGGTATTCAGCAGAATAAATAATTCGCAGTAAATATCATTCTCTGTCTTCCCCTGTTCT
CATTCCCATTTTGGAAGACCAGCAGGGGAGTCCTGTTGTGGCTCGGTGGTAACAAACACG
ACTAGCGTCCATGAGGATGCGGGGTCCGTCCTTTGCTTCGCTCGGTGGGTTAAGGATCCG
GCATTGCCACAAGCTGTGGTGTAGGTCGCAGACGTGGCTTGGATCCTGTGTTGCTGTGGC
TGGGGTATCGGCCGGCAGCTGGAGCTCTGATTTGACCCCTAGCCTGGGAACCTCCACGTG
CTGCAGGTGCGGCCCTAAAAAGCAAAAAAGAAAGAAGCAACCATAGGAGCTATTGGGAGA
AAATGGGTAGCCTTCCCAAAATGACTCTTCGTAGTTTCAGTGGACATT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-663, gnl|bosTau2|chr12 (45967631-45966969)
               

               
               1-663, gnl|Hg17|chr13 (110351074-110350235)
               

               
               1-663, gnl|Mm7|chr8 (11591901-11591272)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-663, gnl|bosTau2|chr12 (45967631-45966969)
               

               
               1-663, gnl|Hg17|chr13 (110351074-110350235)
               

               
               1-663, gnl|Mm7|chr8 (11591901-11591272)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               thg (0.126791)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)

	1-663, gnl\|bosTau2\|chr12 (45967631-45966969)
	1-663, gnl\|Hg17\|chr13 (110351074-110350235)
	1-663, gnl\|Mm7\|chr8 (11591901-11591272)