Non-Coding RNA Search

Ss1.1-Pig2-34C16.5

Sequence:


               
               GCTGCAGGAATTCGGCACAGGCACGTGTTCCGCTATGCGGCCCGGGAGCTCTTTGGAATC
CACGTCACTGAAGTCACCTACAGACCCCTGAGGAACAAGGACCTCCAGGAGGTGACTTTG
GAGCGGGAGGGCCAGGTCCTGCTGCACTTTGCTGCAGCCTACGGCTTCCGCAACATCCAG
AACCTGGTGCAGAAGCTCAAGCGAGGGCGGTGCCCGTACCATTACGTGGAGGTCATGGCC
TGCCCTGCTGGCTGCCTGAATGGCGGAGGCCAGCTCAAGGCCCCCGACACACCTGGCAAG
GAGCTGCTCCAGCAGGTGGAGAGGCTGTATGCCATGGTCAGGACACAGGCGCCGGAGGAC
GCACCCGGGGTCCAGGAGCTGTACAGGCGCTGGCTGCAGGGCGAGGGCTCAGAGCGGGCC
AGCCAGCTGCTGCACACAAGCTACCACGCGGTGGAGAAGGCTGGCTCCAGCCTCAACATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGCAGGAATTCGGCACAGGCACGTGTTCCGCTATGCGGCCCGGGAGCTCTTTGGAATC
CACGTCACTGAAGTCACCTACAGACCCCTGAGGAACAAGGACCTCCAGGAGGTGACTTTG
GAGCGGGAGGGCCAGGTCCTGCTGCACTTTGCTGCAGCCTACGGCTTCCGCAACATCCAG
AACCTGGTGCAGAAGCTCAAGCGAGGGCGGTGCCCGTACCATTACGTGGAGGTCATGGCC
TGCCCTGCTGGCTGCCTGAATGGCGGAGGCCAGCTCAAGGCCCCCGACACACCTGGCAAG
GAGCTGCTCCAGCAGGTGGAGAGGCTGTATGCCATGGTCAGGACACAGGCGCCGGAGGAC
GCACCCGGGGTCCAGGAGCTGTACAGGCGCTGGCTGCAGGGCGAGGGCTCAGAGCGGGCC
AGCCAGCTGCTGCACACAAGCTACCACGCGGTGGAGAAGGCTGGCTCCAGCCTCAACATC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               86-251, gnl|bosTau2|chr25 (1172986-1173151)
               

               
               86-251, gnl|Hg17|chr16 (721009-720843)
               

               
               86-251, gnl|Mm7|chr17 (23964921-23965086)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               86-251, gnl|bosTau2|chr25 (1172986-1173151)
               

               
               86-251, gnl|Hg17|chr16 (721009-720843)
               

               
               86-251, gnl|Mm7|chr17 (23964921-23965086)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               csp (0.161186)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csp (0.161186)

	86-251, gnl\|bosTau2\|chr25 (1172986-1173151)
	86-251, gnl\|Hg17\|chr16 (721009-720843)
	86-251, gnl\|Mm7\|chr17 (23964921-23965086)